Streptomyces rubrolavendulae: A4G23_03859
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Entry
A4G23_03859 CDS
T04616
Symbol
sigF_6
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srn
Streptomyces rubrolavendulae
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srn03021
]
A4G23_03859 (sigF_6)
Transcription machinery [BR:
srn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A4G23_03859 (sigF_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
NirdL-like_HTH
HTH_10
HTH_24
HTH_3
Sigma70_ECF
DUF7343
HTH_AsnC-type
IF2_N
HTH_Crp_2
MarR
GerE
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AOT60982
UniProt:
A0A1D8G695
LinkDB
All DBs
Position
complement(4449201..4450178)
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AA seq
325 aa
AA seq
DB search
MRDGDGPVRNEERGPRAAGAAEDVAGIPEQQARPHPVDGPADGRAEAPERARVERAARMS
GNDDEQRGGSRRPDPQDRSGARAMFVRLRSLPDGSPERAELRNQLVRMHLPLVEHLARRF
RNRGEPLDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIKRHFRDKGWAVRVPR
RLQELRLSLTSATAELSQLHGRSPTVHELAEKLGISEEEVLEGLESANAYSTLSLDVPDT
DDESPAVADTLGAEDEALEGVEYRESLKPLLEGLPPREKRILLLRFFGNMTQSQIAQEVG
ISQMHVSRLLARTLAQLRERLLVEE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgagagacggggacggtccggtgcggaacgaggagcgcggcccgcgggccgcgggcgcg
gcggaggacgtcgcgggcatcccggagcagcaggcgcggccgcacccggtggacggtccg
gcggacggccgggcggaggcgccggagcgggcgcgggtggagcgggcggcgcggatgagc
gggaacgacgacgagcagcggggcgggagccggcggcccgacccgcaggaccggagcggc
gcgcgggcgatgttcgtgcggctgcggagcctgccggacggttcgccggagcgggccgag
ctgcgcaaccagctcgtgcggatgcacctgccgctcgtcgagcacctcgcgcgccggttc
cgcaaccggggcgagccgctggacgacctgacccaggtcgcgacgatcggcctgatcaag
tcggtcgaccggttcgacccggagcggggcgtcgagttctcgacgtacgcgacgccgacc
gtcgtcggcgagatcaagcggcacttccgcgacaagggctgggcggtccgggtgccccgg
cggctccaggagctgcggctgtcgctgacgtcggcgacggcggagctgtcccagctgcac
ggacggtcaccgaccgtgcacgagctggcggagaagctggggatctccgaggaggaggtc
ctggagggcctggagtcggccaacgcgtactcgacgctgtcgctggacgtgccggacacg
gacgacgagtcgccggccgtcgcggacacgctgggcgcggaggacgaggcgctggagggc
gtcgagtaccgggagtcgctgaagccgctgctggagggcctgccgccgcgggagaagcgg
atcctgctgctgcggttcttcgggaacatgacgcagtcgcagatcgcgcaggaggtgggc
atctcccagatgcacgtctcccggctgctggcccgcaccctggcgcagctccgcgagcgg
ctgctggtggaggagtag
DBGET
integrated database retrieval system
