Streptomyces rubrolavendulae: A4G23_04234
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Entry
A4G23_04234 CDS
T04616
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
srn
Streptomyces rubrolavendulae
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srn03016
]
A4G23_04234 (truB)
Enzymes [BR:
srn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A4G23_04234 (truB)
Transfer RNA biogenesis [BR:
srn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A4G23_04234 (truB)
Prokaryotic type
A4G23_04234 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AOT61351
UniProt:
A0A1D8G7B8
LinkDB
All DBs
Position
4891838..4892767
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AA seq
309 aa
AA seq
DB search
MSSTANTPLPAGAGRGPRDGLVIVDKPAGFTSHDVVAKMRGIARTRRVGHAGTLDPMATG
VLVLGVEKATKLLGHLALTEKEYLGTIRLGQNTVTDDAEGEITSSTDASRVTREGVDAAV
AKLTGDIMQVPSKVSAIKIDGKRSYARVRGGEDFDIPARPVTVSQFTVYDMRDAVAEDGT
PVVDLVVSVVCSSGTYIRALARDVGADLGVGGHLTALRRTRVGPYKLDAARTLDQLQEQL
TVMPIAEAAAAAFPRWDVDERRAKLLLNGVRIDMPAYREGPVAVFGPEGRFLALVEERGG
RAKSVAVFG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacagcgaacacgcccctcccggccggtgccgggaggggcccccgcgacggc
ctcgtcatcgtcgacaagccggccgggttcacctcccacgacgtcgtcgccaagatgcgc
ggcatcgcccgcacccgccgcgtcggccacgccggcacgctcgaccccatggccacgggc
gtcctcgtcctcggcgtggagaaggccaccaagctcctcggccacctcgcgctgacggag
aaggagtacctgggcaccatccgcctcggccagaacaccgtcaccgacgacgcggagggc
gagatcacctcgtccaccgacgcgtcccgcgtcacccgcgagggcgtcgacgcggccgtc
gccaagctcaccggcgacatcatgcaggtcccgtcgaaggtcagcgccatcaagatcgac
gggaagcggtcctacgcgcgggtgcgcggcggtgaggacttcgacatcccggcccgcccg
gtcaccgtctcccagttcaccgtgtacgacatgcgcgacgccgtcgccgaggacggcacc
cccgtcgtcgacctggtcgtctccgtcgtctgctcgtccggcacgtacatccgcgccctc
gcccgcgacgtcggcgccgacctgggcgtcggcggccacctgaccgccctgcgccgcacc
cgcgtcggcccctacaagctcgacgcggcccgcaccctggaccagctccaggagcagctg
accgtcatgcccatcgcggaggccgccgctgccgccttcccccgctgggacgtggacgag
cggcgagcgaagctgctgctcaacggcgtacggatcgacatgcccgcctaccgggagggc
cccgtcgccgtcttcggccccgagggccgcttcctggccctcgtcgaggagcgcgggggc
cgggccaagagcgtcgccgtcttcggctga
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