KEGG   Streptomyces rubrolavendulae: A4G23_04277
Entry
A4G23_04277       CDS       T04616                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
srn  Streptomyces rubrolavendulae
Brite
KEGG Orthology (KO) [BR:srn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srn03400]
    A4G23_04277
Enzymes [BR:srn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A4G23_04277
    5.6.2.6  RNA 3'-5' helicase
     A4G23_04277
DNA repair and recombination proteins [BR:srn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    A4G23_04277
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_3rd_Lhr DEAD WHD_4th_Lhr Helicase_C ResIII AbiEi_4 DUF6406 AAA_25 PhoH
Other DBs
NCBI-ProteinID: AOT61390
UniProt: A0A1D8G7H6
LinkDB
Position
complement(4957010..4961644)
AA seq 1544 aa
MGGMAGTALDSFSPATRRWFTGAFSAPTAAQEGAWRAIGAGSDVLVVAPTGSGKTLAAFL
AALDRLVSVPPPADAKKRCRVLYVSPLKALAVDVERNLRSPLTGIRQEAVRLGLPEPEVR
VGIRSGDTPAAERRSLATRPPDILITTPESLFLMLTSAARDALAGVETVILDEVHAVAGT
KRGAHLALSLERLDELLPRPARRIGLSATVRPVDEVARYLSPQRKVEVVQPRSGKEFDLS
VVVPVEDLGELGGSPAADAGEGPGEKPSIWPHVEERIADLVQEHRSTIVFANSRRLAERL
CNRLNEIAYERATGEAMPSDASPAEVMAQSGAAKGAPPLLARAHHGSVSKEQRALVEEDL
KAGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSRGVVFPK
YRGDLVQAAVVTERMRQGAIESLRVPANPLDVLAQQLVAMVAMDTWSHDDLLALVRRAAP
FASLPESAFTAVLDMLAGRYPSDAFAELRPRVVWDRVTGAVTGRPGAQRLAVTSGGTIPD
RGLFGVFLAGADPKRGGGRVGELDEEMVYESRVGDVFTLGTSSWRIEDITRDRVLVSPAP
GVPGRLPFWKGDQLGRPLELGRAVGAFLREVGSLPPQDARLRLVAAGLDAWAADNVLAYL
DEQRRACGHVPDDRTILVERFRDEMGDWRVVVHSPFGAQVHAPWALALGARLAERYGMDA
QVMHADDGIVLRLPDADLMGLDLLDEEPAAPGLEYDSEQAPVGAADVAFDKGEIDRVVTE
QVGGSALFASRFRECAARALLLPKRNPGKRTPLWQQRQRAAQLLQVASEFGSFPIVLEAV
RECLQDVFDVPGLQELMGDLESRRVRLVEVTTPEPSPFARSLLFGYVAQFLYEGDSPLAE
RRAAALSLDSRLLAELLGQAELRELLDPEVLAELEGELQWRTDERRVKDPEGVADALRVL
GPLTDAELTARGADPGWARELAAARRAIRVRVAGADHWAAIEDAGRLRDALGTALPVGVP
EAFTEPVKDPLGDLLARYARTHGPFTSAGAAARFGLGTAVTDGALHRLAAAGRVVQGEFH
PSGIGQEWCDAAVLRRLRRRSLAALRQELEPVPPSALATFLPQWQHVGSSGLRGIDGLAR
AIEQLQGAPVPASALEKLVLPSRVRDYGPQLLDELTTTGEVVWAGAGALPGKDGWVSLYL
ADAAPLLLPPPHPLELTALHESVLTILSGGYGLFFRQVADQVRATAHPDVTDPQLADALW
DLAWSGRLTNDTLAPLRAMLGSGRTAGSTAHRARRPVPRGRYGTLTAAARTASRSGPPTV
SGRWSLLPAAEPEATHRAHALARTLLDRHGVVTRGAVAAEGVEGGFSATYRVLSAFEDSG
QARRGYVVEGLGAAQFAMDGAVDRLRAAASARERGEGSAAPQAVVLAAADPANAYGAALP
WPEPPDGAGHKPGRKAGSLVVLVDGELTLYMERGGKSLLSWPLDPDAPALRAAADALAAA
ASAGALGTVTVERVNGAAALTSPLSRALEAAGFHATPRGLRLRA
NT seq 4635 nt   +upstreamnt  +downstreamnt
atggggggcatggccgggaccgcactcgactccttctcccccgcgacccgcaggtggttc
acgggggccttcagcgcgcccaccgccgcccaggagggggcgtggcgggcgatcggcgcg
ggttcggacgtgctggtggtggcgccgaccggctcgggcaagacactggcggcgttcctg
gcggcgctggaccggctggtctcggtcccgccgcccgccgacgcgaagaagcgctgccgg
gtgctgtacgtgtccccgctgaaggcgctcgcggtcgacgtggagcggaacctgcgcagt
ccgctgacgggcatccgccaggaggccgtacggctggggctgccggagccggaggtccgc
gtcggcatccgttcgggtgacacgcccgccgcggagcggcggtcgctggcgacgcgcccg
ccggacatcctgatcaccacgccggagtcgctgttcctgatgctgacgtccgcggcgcgg
gacgcgctggcgggtgtggagacggtgatcctcgacgaggtgcacgccgtggcgggcacc
aagcggggcgcccatctggcgctgtccctggagcggctggacgagctgctgccgcgcccc
gcgcgccgcatcggcctgtcggcgacggtgcggcccgtggacgaggtggcgcggtacctg
tcgccgcagcggaaggtggaggtggtccagccgcggtcgggcaaggagttcgacctgtcc
gtggtggtgcccgtggaggacctgggcgagctgggcggctcgccggccgccgacgcggga
gaggggccgggcgagaagccgtcgatctggccgcacgtggaggagcggatcgccgacctg
gtgcaggaacaccgctcgacgatcgtgttcgccaactcgcggcgcctcgcggagcggctg
tgcaaccggctgaacgagatcgcgtacgagcgcgccaccggcgaggcgatgccgtcggac
gcctcccccgccgaggtgatggcccagtccggcgccgccaagggcgccccgccgctgctg
gcgcgggcgcaccacggctcggtgtccaaggagcagcgggccctcgtcgaggaggacctg
aaggcgggccgcctccccgcggtggtggccacgtccagtctggagctgggcatcgacatg
ggcgcggtcgacctggtcgtccaggtggagtcgccgccctccgtggcgtccgggctccag
cgcgtgggccgcgccgggcaccaggtgggcgccgtgtcgcggggcgtggtgttccccaag
taccggggcgacctggtgcaggcggcggtggtgaccgagcgcatgcggcagggcgccatc
gagtcgctgcgcgtcccggccaacccgctggacgtgctggcccagcagctggtcgccatg
gtcgcgatggacacgtggagccatgacgacctgctggcgctggtgcggcgggcggctccg
ttcgcgtcgctgccggagtcggcgttcacggccgtgctggacatgctcgccgggcgctat
ccgtcggacgcgttcgcggagctgcggcccagagtcgtgtgggaccgggtcaccggggct
gtcacgggtcgccccggcgcccagcggctcgccgtcacctcgggtggcacgatcccggac
cgcgggctgttcggggtgttcctggcgggcgccgaccccaagcggggcggcggccgggtc
ggcgagctcgacgaggagatggtgtacgagtcgcgcgtgggcgacgtgttcaccctcggc
acgtcgtcctggcgcatcgaggacatcacgcgcgaccgggtgctggtgtcacccgcgccc
ggcgtgccgggccggctgccgttctggaagggcgaccagctgggccgcccgctcgaactg
ggcagggcggtgggggccttcctgcgggaggtcggttcgctgccgccccaggacgcgcgg
ctgcggctggtggcggcgggcctggacgcgtgggccgccgacaacgtcctggcgtacctg
gacgagcagcgccgtgcctgcgggcacgtgccggacgaccggacgatcctggtggagcgg
ttccgcgacgagatgggcgactggcgcgtggtggtccactcgccgttcggcgcccaggtg
cacgccccgtgggcgctcgcgctcggcgcccgcctcgccgagcggtacggcatggacgca
caggtcatgcacgccgacgacggaatcgtgctgcgcctgcccgacgcggacctgatgggt
ctcgacctgctcgacgaggaaccggccgcgccgggcctggagtacgacagcgagcaggca
cccgtcggcgccgcggacgtcgccttcgacaagggcgagatcgaccgggtcgtcaccgag
caggtcggcggttcggcgctgttcgcgtcccgcttccgggagtgcgccgcccgcgcgctg
ctgctgcccaagcgcaatccgggcaagcgcacaccgctgtggcagcagcgccagcgcgcc
gcgcaactgctgcaggtggcgagcgagttcggttcgttccccatcgtgctggaagcggtc
cgggaatgcctccaggacgtgttcgacgtgccgggcctccaggagctgatgggcgacctc
gagtcgcgccgcgtccggctggtggaggtcaccaccccggagccgtcgccgttcgcccgc
tcactgctgttcggatacgtcgcccagttcctgtacgagggggactcgccgctcgccgag
cgccgcgcggcagccctgtccctcgactcccggctgctggccgagctgctgggccaggcg
gagctgcgggaactcctcgacccggaggtgctggccgagctggagggcgagctgcagtgg
cgcacggacgagcggcgggtgaaggaccccgagggggtcgccgacgcactgcgcgtgctg
ggcccgctcaccgacgccgagctgaccgcgcggggcgccgacccggggtgggcgcgggag
ctggcggccgcccgccgtgcgatccgggtccgtgtcgcgggcgccgaccactgggcggcg
atcgaggacgccgggcgcctgcgcgacgcgctgggcacggccctgccggtcggcgtcccc
gaggcgttcaccgagccggtgaaggacccgctcggcgacctcctcgcgcggtacgcgcgc
acccacggccccttcacctccgccggggcggccgcccgcttcggcctgggcacggccgtc
acggacggcgcgctgcaccgcctcgccgccgcgggccgtgtcgtgcagggcgagttccac
ccgtcgggaatcggccaggagtggtgcgacgcggcggtgctgcgccggctgcggcgccgc
tccctggcggcgctgcggcaggagctggagccggtcccgccgtccgcgctcgccacgttc
ctgccgcagtggcagcacgtgggcagcagcggactgcgcggcatcgacggcctggcccgc
gcgatcgagcagctgcagggcgcgcccgtgcccgcgtcggcgctggagaagctggtcctg
ccgtcccgcgtccgcgactacggcccccagctcctcgacgagctgaccaccacgggcgag
gtcgtgtgggccggggcgggcgccctgccgggcaaggacggctgggtgtcgctgtacctg
gccgacgccgccccgcttctgctgccgccgccacacccgctggagctgacggcactgcac
gagtcggtgctcacgatcctgtccggcgggtacgggctgttcttccgtcaggtcgcggac
caggtgcgggcgacggcccacccggacgtgacggacccccagctggccgacgccctgtgg
gacctggcctggtcgggccggctcaccaacgacacgctcgccccgctccgcgcgatgctg
ggctccggccgtacggcggggtccaccgcgcaccgcgccaggcgccccgtcccgcgcggc
cggtacggcacgctgacggccgccgcccgcacggcgtcccgatccgggccgccgacggtg
agcggccgctggtcgctgctcccggccgccgagccggaggccacgcaccgcgcccacgcc
ctggcccggaccctgctggaccggcacggtgtggtgacgcgcggcgcggtggccgccgag
ggcgtcgagggcggcttctccgcgacgtaccgggtgctgtccgccttcgaggacagtggc
caggcccgccgcgggtacgtcgtggagggcctgggcgccgcgcagttcgccatggacggg
gcggtggaccggctgcgggccgccgcgtcggcccgcgagcgcggggaggggtcggcggcg
ccgcaggccgtcgtcctggccgcggccgacccggccaacgcctacggcgccgccctgccg
tggccggagccgccggacggcgccggccacaagccgggccgcaaggcgggctccctggtg
gtcctggtggacggcgagctgacgctgtacatggagcggggcggcaagtccctgctgtcg
tggccgctcgacccggatgccccggccctgcgggcggcggccgacgccctggcggcggcc
gcgagcgcgggcgcgctgggcacggtcacggtcgagcgcgtcaacggcgccgccgcactg
acgtcaccgctgtcccgcgccctggaggcggcgggcttccacgccaccccgcggggcctg
cgcctgcgcgcctga

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