Streptomyces rubrolavendulae: A4G23_04903
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Entry
A4G23_04903 CDS
T04616
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
srn
Streptomyces rubrolavendulae
Pathway
srn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4G23_04903 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srn03000
]
A4G23_04903 (alkA)
03400 DNA repair and recombination proteins [BR:
srn03400
]
A4G23_04903 (alkA)
Enzymes [BR:
srn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
A4G23_04903 (alkA)
Transcription factors [BR:
srn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
A4G23_04903 (alkA)
DNA repair and recombination proteins [BR:
srn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A4G23_04903 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AOT62011
UniProt:
A0A1D8G985
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All DBs
Position
5798115..5799590
Genome browser
AA seq
491 aa
AA seq
DB search
MHTDTERCVRAVRSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKPENMVFYPSAAACQQA
GFRACKRCRPDTSPGSPEWDVRADTVARAMRLIRDGVVDREGVPGLAARLGYSTRQIERQ
LLAELGAGPLALARAQRAQTARVLIETTALPMADVAFAAGFSSVRAFNDTVREVFALAPT
ELRARAAGRRGAPVPIPGVIALRLPYRTPLDPSNLFGHLAATAVPGVEEWRDGAYRRTLA
LPYGHGIATLAPATDHISCRLHLTDPRDLAHAISRCRWLLDLDADPVAVDEQLRADPVLA
PHVDRAPGRRVPRTVDAAEFAVRAVLGQQVSTAAARTHAGRLVTAHGTPVEDPDGGLTHL
FPAPEALAALDPGALALPRSRRATLTTLVGALADGRLKLGPGTDWDEARAGLLALPGFGP
WTVEVVAMRALGDPDAFLPTDLGVRRAAAGLGLPSTPAALTARAAAWRPWRAYAVQYLWA
TGSHPVNHLPA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgagcgctgcgtgcgggccgtccggtcgaaggacgcccgcttcgac
ggctggttcttcaccgccgtcctcaccacccgcatctactgccgccccagctgcccggtc
gtgcctcccaagccggagaacatggtcttctacccgagcgccgccgcctgtcagcaggcc
ggtttccgggcctgcaagcggtgccgccccgacaccagccccggttccccggagtgggac
gtccgcgccgacaccgtcgcccgggccatgcgcctcatccgcgacggggtcgtcgaccgc
gagggcgtccccggactcgccgcccggctcggctactcgacccgccagatcgagcggcag
ctcctcgccgagctgggcgccggaccgctcgccctcgcccgtgcccagcgcgcccagacc
gcgcgggtgctcatcgagaccacggccctgcccatggcggacgtggcgttcgccgccggg
ttctcctccgtgcgggccttcaacgacaccgtgcgcgaggtcttcgcgctcgccccgacc
gagctgcgcgcccgcgccgccggtcggcggggcgccccggtccccatccccggcgtgatc
gcgctgcggctgccgtaccgcaccccgctcgacccgtccaacctgttcggccacctcgcg
gcgaccgccgtccccggcgtcgaggagtggcgcgacggcgcctaccggcgcaccctcgcc
ctcccgtacgggcacggcatcgccaccctcgccccggccaccgaccacatctcctgccgc
ctccacctgaccgacccgcgcgacctggcccacgccatcagccgctgccgctggctcctg
gacctcgacgccgaccccgtcgccgtggacgagcagctgcgcgccgaccccgtcctcgcc
ccgcacgtcgaccgcgcccccggccgccgcgtgccccgcacggtcgacgccgccgagttc
gccgtccgcgccgtgctcggccagcaggtctccacggccgcggcccgcacccacgccggg
cgcctcgtgacggcgcacggcacccccgtcgaggacccggacggcgggctcacccacctg
ttccccgcgcccgaggcgctcgccgcgctcgaccccggcgccctcgcgctgccgcgcagc
cgccgcgccacgctcaccacgctggtcggcgccctcgcggacggccgcctcaagctcggc
cccggtacggactgggacgaggcccgcgccggactcctcgccctgcccggcttcggcccg
tggacggtggaggtcgtcgcgatgcgggcgctcggcgaccccgacgccttcctccccacc
gacctcggggtccgccgcgccgcggcggggctcggcctgccgtccacccccgcggccctc
accgcccgcgccgccgcctggcgcccctggcgcgcctacgccgtgcagtacctgtgggcg
acgggcagccaccccgtcaaccacctccccgcctga
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