Streptosporangium roseum: Sros_1493
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Entry
Sros_1493 CDS
T01137
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sro
Streptosporangium roseum
Pathway
sro00040
Pentose and glucuronate interconversions
sro01100
Metabolic pathways
sro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Sros_1493
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sros_1493
Enzymes [BR:
sro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Sros_1493
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ACZ84486
UniProt:
D2AQE2
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All DBs
Position
complement(1576228..1577535)
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AA seq
435 aa
AA seq
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MKRAVALTAVLSLAVLAAPPASATPAPRLAPPASYPGPDLGRRTLPANDGWAAEGPGTTG
GAAAPAANVHTVSTRTGLAAALAAPSPKIIYIRGTVGTDRTCADYTTGGYTLDAYLAAYD
PAVWGRDTEPAGPLEDARAASAARQTANIKLKVGSDTTIVGLGKDATIRGVNLHVDKADN
VIIRNLTFEDTADCFPQWDPTDGAEGNWNSLYDNISVTGSTHVWADHNTFTDGDNPDSGQ
PLYFGRPYQVHDGQLDITGGSNHVTASWNRFAGHDKTMLIGSTNNPAADSGKLKVTVHHN
HFDNALQRLPRVRFGQVHVYNNYYEVPDASAFVYALGVGVQSQIFAENNFFRLGRAVDPA
TLIYNWGGTSLTTRGNVLRVGGKVTPIDLVAAHNAVNDPDLGADAGWTPTLHTGVDPAES
VRLSVSRHAGAGHAR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagccgtcgcgctcaccgccgtcctgtccctggcggtcctcgccgccccaccc
gcctcggccacgccggccccccgcctcgcgccgcccgcctcgtaccccggtcccgacctc
ggccgccggaccctccccgcgaacgacggctgggcggccgaaggccccggcaccaccggc
ggcgcggccgctccggccgccaacgtgcacaccgtgtccacccggaccgggctggccgcc
gcgctcgccgctccctcgccgaagatcatctatatccgggggaccgtcggcaccgaccgc
acctgcgccgactacacgaccggcggctacaccctggacgcctacctggccgcctacgac
cccgcggtgtggggcagggacaccgagcccgccggcccgctggaggacgcgagagccgcg
tcggccgcgcggcagaccgcgaacatcaagctcaaggtcggctcggacaccaccatcgtc
ggcctgggcaaggacgcgaccatccgcggcgtcaacctgcacgtggacaaggccgacaac
gtcatcatccggaacctcaccttcgaggacaccgccgactgcttcccgcagtgggacccg
accgacggcgccgagggcaactggaactccctctacgacaacatctcggtgaccggctcc
acgcacgtgtgggccgaccacaacaccttcaccgacggcgacaaccccgactcgggccag
cccctgtacttcggcaggccgtaccaggtccacgacgggcagctcgacatcaccggcggc
tccaaccacgtcacggcctcgtggaaccggttcgccggccacgacaagacgatgctgatc
ggctcgaccaacaacccggcggccgactcgggcaagctcaaggtcaccgtccaccacaac
cacttcgacaacgcgctgcagcggctcccccgcgtccgcttcggccaggtgcacgtctac
aacaactactacgaggtgccggacgcctcggccttcgtctacgcgctcggcgtgggcgtg
cagtcgcagatcttcgccgagaacaacttcttccgcctcggccgggcggtggatccggcg
accctgatctacaactggggcggcacgtccctgaccacccggggaaacgtgctgcgggtc
ggcggcaaggtcaccccgatcgacctcgtcgccgcccacaacgcggtcaatgaccccgac
ctcggcgcggacgccgggtggacccccaccctgcacaccggggtcgatcccgcggagtcg
gtgcgcctgtcggtgtcgcggcacgcgggagccggtcacgcgcgctag
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