Streptosporangium roseum: Sros_3106
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Entry
Sros_3106 CDS
T01137
Name
(GenBank) putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
sro
Streptosporangium roseum
Brite
KEGG Orthology (KO) [BR:
sro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sro03021
]
Sros_3106
Transcription machinery [BR:
sro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sros_3106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Tnp_4
DUF7343
MarR
HTH_10
HTH_23
HTH_Crp_2
HTH_28
HTH_3
MarR_2
Sigma70_ECF
HTH_24
HTH_AraC
KORA
PAS
GerE
DUF1525
HTH_37
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ACZ86054
UniProt:
D2BA41
LinkDB
All DBs
Position
3388600..3389376
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AA seq
258 aa
AA seq
DB search
MSVQALELTDMTAEELLAEMVLPEISEYRAERLRERIVEMHRPLAMEIARRYRYRGEPLE
DLLQAAYVGLMKAINGFDPTLGHAFRGYAVVTMTGEVKRHFRDRTWAIRVPRVYQERRAE
LNRLVADLSQDLGRAPTVAELAVKMRISEEDVLLTLDASAAYSALSLDAPLGADDDAAAL
GDIIPDEDDALGVLVDREAVKPLIDKLPTREKNILLLRFFGNMTQAEIAAEFGISQMHVS
RILRKVLDQLREELVAEC
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcaggccctcgaactcaccgacatgaccgccgaggaactcctcgccgagatg
gttctgcccgagatctccgaataccgcgccgagcgcctgcgcgagcggatcgtcgagatg
caccggccgctcgcgatggagatcgcccgccgctaccgctaccggggcgagccgctggag
gacctcctccaggccgcctacgtcgggctgatgaaggccatcaacggcttcgaccccact
ctcggtcacgccttccgcggctacgccgtggtcaccatgaccggcgaggtcaagcgacac
ttccgcgaccgcacctgggccatccgcgtaccccgcgtctaccaggagcgcagggccgag
ctgaaccggctggtcgccgacctcagccaggatctcggccgcgcgccgacggtcgccgag
ctcgccgtgaagatgaggatctccgaagaggacgtcctgctcaccctcgacgcctcggcc
gcctacagcgcgctctcgctcgacgcgccgctcggcgccgacgacgacgcggctgcgctg
ggcgacatcatccccgacgaggacgacgcgctgggcgtgctcgtggaccgcgaggcggtc
aagccgctgatcgacaagctgccgacgcgtgagaagaacatcttgctgctgcgcttcttc
ggcaacatgacccaggccgagatcgccgccgagttcgggatctcccagatgcacgtctcc
cgtatcctgcggaaggtgctggaccagctccgcgaggaactcgtcgccgaatgctga
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