Streptosporangium roseum: Sros_3860
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Entry
Sros_3860 CDS
T01137
Name
(GenBank) DNA polymerase III epsilon subunit and related 3'-5' exonuclease-like protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sro
Streptosporangium roseum
Pathway
sro03030
DNA replication
sro03430
Mismatch repair
sro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sros_3860
03430 Mismatch repair
Sros_3860
03440 Homologous recombination
Sros_3860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sro03032
]
Sros_3860
03400 DNA repair and recombination proteins [BR:
sro03400
]
Sros_3860
Enzymes [BR:
sro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sros_3860
DNA replication proteins [BR:
sro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sros_3860
DNA repair and recombination proteins [BR:
sro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sros_3860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
ACZ86778
UniProt:
D2ATQ8
LinkDB
All DBs
Position
complement(4300814..4302037)
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AA seq
407 aa
AA seq
DB search
MPGPGRPRGYAVIDLETTGLRPSWNDRVIEIGIVHLDLSGEVTGEWATLVNPGRDLGPQH
IHGITAADIRHAPAFGEIAGAVAERLDGRVVAAHNLPFDAGFLSHEFGRLGLDTPLDHTA
GVCTMAWSAQFLPGAPRSLAACCARAGVSLNGHHEALADARAAAGLLRHYLALAGPAAPW
EPLIEAVRGAAWPAAGDPGTAGVRRGVAAERDPHFLTRIADRPATPPRPEAATSYLALLD
RALLDHHVSVAESDALVRLASALGLGRGEAERLHLGYLAALARTVLSEGPVTEDDRHELA
LVAALLGLPAEAADRALAGDPASPPPDFTRFRLSPGDLVVFTGEMDGPRDDWEWRALQAG
YIPHGYITRKVRLLVAADPDSLSAKARKARDYGIPIVTPDAFARMLG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggccgggccggccgcgtggatacgcggtcatcgaccttgagacgaccggtctg
cggccgtcgtggaacgaccgggtgatcgagatcgggatcgtgcacctggatctctcgggc
gaggtcaccggggagtgggcgaccctggtcaatcccgggcgcgatctcggcccccagcac
atccacggcatcaccgcggccgacatccggcacgccccggccttcggggagatcgcgggc
gcggtcgccgagcggctcgacggcagggtggtggccgcccacaacctccccttcgacgcg
ggcttcctctcccacgagttcggccgcctgggcctcgacaccccgctcgaccacacggcc
ggggtctgcacgatggcgtggtcggcgcagttcctgcccggggccccgaggagcctggcc
gcctgctgcgccagggccggggtctccctcaacggccaccacgaggccctggccgacgcc
cgcgccgccgccgggctgctccgccactacctggcgctcgccggcccggccgctccctgg
gaaccgctgatcgaggccgtccgcggcgccgcctggccggcggccggcgacccggggacc
gccggggtacggcgcggcgtcgcggccgagcgcgacccgcacttcctgaccaggatcgcg
gaccggccggcgaccccgccccggcccgaggccgcgacctcctacctcgccctgctcgac
cgggcactcctcgaccaccacgtctcggtggccgagtccgacgccctggtccggctcgcc
tccgccctcgggctcgggcggggcgaggcggaacggctgcacctcggctacctcgcggcc
ctggcgcggaccgtcctgtccgaaggcccggtcaccgaggacgaccggcacgagctggcc
ctcgtcgcggccctcctcggcctgcctgcggaggcggcggaccgcgcgctggcgggcgac
cccgcgagcccgccgccggatttcacgcggttccgcctctcccccggcgacctggtcgtc
ttcaccggcgagatggacggtccccgcgacgactgggagtggcgcgccctccaggcgggc
tacatcccgcacggctacatcaccaggaaggtcaggctcctggtcgcggccgacccggac
agcctgtccgccaaggcgcgcaaggcccgtgactacggcatcccgatcgtcacccccgac
gccttcgcccgcatgctcggctag
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