Streptosporangium roseum: Sros_4487
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Entry
Sros_4487 CDS
T01137
Name
(GenBank) Exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sro
Streptosporangium roseum
Pathway
sro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sros_4487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sro03400
]
Sros_4487
Enzymes [BR:
sro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Sros_4487
DNA repair and recombination proteins [BR:
sro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sros_4487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
HHH
AAA_22
Helicase_RecD
PIF1
AAA_16
PhoH
TraI_hel_assoc_N
SLFN-g3_helicase
HHH_3
NPHP3_N
TrwB_AAD_bind
HHH_2
UvrD_C
nSTAND3
AAA
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ACZ87353
UniProt:
D2B1Q1
LinkDB
All DBs
Position
complement(5003625..5005841)
Genome browser
AA seq
738 aa
AA seq
DB search
MKPGSGGPSAASIDAVLERITYANEETGYTIARVATERSGSDLLTVVGPLLGAQPGESLR
LTGRWTSHPKYGKQFEVWSYATVLPATVQGIQRYLGSGLIKGIGPKMAERIVDHFGADTL
QIIETAPERLVEVPGLGPKRTKMIGIAWEEQKIIKEVMIFLQGVGVSTSIAVRIFKQYGD
ASITVVKSEPYRLADDVWGIGFKTADTIAQAVGIPHDSPERVKAGLRYTLSQAADDGHCY
LPAPNLVADAVKILEVPAELTVRCLEELVAEEGVVREEVPAGDSLVPAVYLVPFHRAELS
LAGSLRALLTSGHDRLGVFGSVDWQVALEWLHKQTDAELAPEQAHAVRLALCEKVAVLTG
GPGCGKSFTVRSIVTLARAKKAKVILAAPTGRAAKRLAELTGHEATTVHRLLQLRPGGDA
TFDRDNPLDADLVVVDEASMLDLLLANKLVKAIAPGTHLLFVGDVDQLPSVGAGEVLRDL
LAAEEEIPRVRLTHIFRQAQESGVVVNAHRVNTGLPPALEGMGDFFLFPCEEPEEIAALT
VDVVANRIPRKFGLNPRRDVQVLAPMHRGAAGAGNLNNALQEALTPSREGMPERRYGGRV
YRVGDKVTQLRNNYDKGAAGVFNGTVGVVVDIKPDDHKLTVLTDEDENVEYAFDELDELA
HAYAVSIHRSQGSEYPAVVIPLATSAWMMLQRNLLYTAITRAKKLVVIVGSRRALAQAVR
TRGAGRRHTSLTHRLRSP
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcctggatcgggtggtccctctgccgcgtccatcgacgccgtcctcgaacgcatc
acctacgccaacgaggagaccggctacaccatcgccagggtggccaccgaacgctcgggc
agcgatctgctgaccgtcgtcgggccgctgctgggcgcccagcccggcgagtcgctgcgg
ctgaccgggcgctggacctcccatcccaagtacggcaagcagttcgaggtatggtcctac
gccaccgtgctgcccgccaccgtccagggcatccagcgctacctcggctccgggctgatc
aagggcatcgggccgaagatggccgagcggatcgtcgaccacttcggcgccgacaccctg
cagatcatcgagaccgcccccgagcggctggtcgaggtccccggcctcggccccaagcgg
accaagatgatcggcatcgcctgggaggaacagaagatcatcaaagaggtgatgatcttc
cttcagggagtcggcgtctcgacctccatcgcggtgcggatcttcaagcagtacggcgac
gcctccatcacggtcgtcaagagcgagccctaccggctggccgacgacgtgtggggcatc
ggcttcaaaaccgccgacaccatcgcccaagccgtcggcatcccgcacgacagccccgaa
cgggtcaaggcgggcctgcgctacaccctgtcgcaggcggccgacgacggccactgctac
ctgccggcccccaacctcgtcgccgacgcggtgaagatcctggaggtcccggccgagctg
accgtccgctgcctggaagaactggtcgccgaggagggcgtggtccgcgaggaggtcccc
gccggcgacagcctcgtccccgcggtctacctggtccccttccaccgcgccgagctgtcg
ctggccggctccctgcgcgccctgctgacctccggccacgaccggctgggcgtcttcgga
tcggtggactggcaggtggcgctggaatggctgcacaagcagaccgacgccgagctcgcc
cccgagcaggcccacgccgtacggctggcgttgtgcgagaaggtcgcggtgctgaccggc
gggcccggctgcggcaagagcttcaccgtgcgctccatcgtcaccctcgcgcgcgccaag
aaggcgaaggtcatcttggccgcgcccaccggccgggcggccaagaggctcgcggagctg
accggccacgaggccaccaccgtgcaccggctgctgcaactgcgccccggcggggacgcc
accttcgaccgcgacaaccccctggacgccgacctggtcgtggtcgacgaggcctcgatg
ctggacctgctgctggccaacaaactggtcaaggccatcgcgccgggcacgcacctgttg
ttcgtgggggatgtggaccagctgccctcggtcggcgccggcgaggtgctgcgggacctg
ctggccgccgaggaggagatcccccgggtacggctgacccacatcttccgccaggcacag
gagtcgggcgtggtcgtcaacgcccaccgcgtcaacaccggcctgcccccggcactggag
ggcatgggcgacttcttcctgttcccgtgcgaggagccggaggagatcgcggcgctgacc
gtcgatgtggtggccaaccggatcccgcgcaagttcggcctcaacccgcgccgggacgtg
caggtgctggcgccgatgcaccggggcgccgcgggggcgggcaacctcaacaacgcgctg
caggaggcgctgaccccctcgcgcgagggcatgcccgaacgccgctacggcggccgtgtc
taccgggtcggcgacaaggtgacccagctgcgcaacaactacgacaagggcgcggcgggg
gtgttcaacgggaccgtgggcgtggtggtcgacatcaaacccgacgaccacaagctgacc
gtgctgaccgatgaggacgagaacgtcgaatacgccttcgacgagctggacgagctggca
cacgcctacgcggtgtccatccaccgctcccagggcagcgagtatccggcggtggtcatc
ccgctggccaccagcgcgtggatgatgctgcagcgcaacctgctctacaccgcgatcacc
cgggccaagaagctcgtcgtcatcgtcggctcacgccgggcgctggcccaggcggtgcgc
acccgcggcgccggacggcgtcacaccagcctcacccaccggctgcgctcgccttag
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