Streptosporangium roseum: Sros_4506
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Entry
Sros_4506 CDS
T01137
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sro
Streptosporangium roseum
Pathway
sro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sros_4506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sro03019
]
Sros_4506
03110 Chaperones and folding catalysts [BR:
sro03110
]
Sros_4506
03029 Mitochondrial biogenesis [BR:
sro03029
]
Sros_4506
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sro04147
]
Sros_4506
Enzymes [BR:
sro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Sros_4506
Messenger RNA biogenesis [BR:
sro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Sros_4506
Chaperones and folding catalysts [BR:
sro03110
]
Heat shock proteins
HSP60 / Chaperonin
Sros_4506
Mitochondrial biogenesis [BR:
sro03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Sros_4506
Exosome [BR:
sro04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Sros_4506
Exosomal proteins of other body fluids (saliva and urine)
Sros_4506
Exosomal proteins of breast cancer cells
Sros_4506
Exosomal proteins of colorectal cancer cells
Sros_4506
Exosomal proteins of bladder cancer cells
Sros_4506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
ACZ87371
UniProt:
D2B1R9
LinkDB
All DBs
Position
5022696..5024321
Genome browser
AA seq
541 aa
AA seq
DB search
MTAKMIAFDEDARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEI
ELEDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMSLKKGI
EAAVERVSEELSNLAKDVETKEQIASTASISAADPEIGSLIAEAMDKVGKEGVITVEESN
TFGLELELTEGMRFDKGYISPIFITDPDRLEAVLDEPYVLLVSGKVAANREVLPVLDKVV
QSGRPLLVIAEDIEGEALATLVVNKMKGLFRSVAVKAPGFGDRRKAMLGDIGILTGAQVI
SEDLGLKLESTTLDQLGRARQVIVTKDETTIVDGGGDAEQIAGRVNQIRAEIDNTDSDYD
REKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALLQ
AGAKAFDKLELSGDEATGAAIVKKALEEPLKQIAVNAGLEGGVVVEKVRNLTPGEGLNAA
TGEYVNMFESGIIDPAKVTRSALQNAASIAALFLTTEAVIAEKPEKAGAAPAMPGGGDMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgaaaatgatcgcctttgacgaggacgcccggcgcggcctggagcgcggtatg
aaccagctcgcggacgccgtcaaggtgaccctcggccccaagggccgtaacgtcgtcctg
gagaagaagtggggcgcacccacgatcaccaacgacggtgtctccatcgccaaggagatc
gagctcgaggacccgtgggagaagatcggggccgagctcgtcaaggaagtcgccaagaag
accgacgacgtcgcgggcgacggcaccaccaccgccaccgtgctcgcccaggctctcgta
cgtgagggcctgcgcaacgtcgccgccggcgccaacccgatgtccctgaagaagggcatc
gaggccgccgtcgagcgcgtctccgaggagctgtccaatctggccaaggacgtggagacc
aaggagcagatcgcctccaccgcctccatctccgccgccgatcccgagatcggctcgctc
atcgccgaggcgatggacaaggtcggcaaggaaggagtcatcaccgtcgaggagagcaac
accttcggcctggagcttgagctcaccgagggcatgcgcttcgacaagggctacatctcc
cccatcttcatcaccgaccccgaccggctcgaagcggtgctcgacgagccgtacgtgttg
ctcgtgagcggcaaggtcgccgccaacagggaggtgctgccggtcctcgacaaggtcgtg
cagtcgggcaggccgctgctggtcatcgccgaggacatcgagggcgaggccctggccacc
ctggtcgtcaacaagatgaagggtctcttccggtcggtcgcggtcaaggcgccgggcttc
ggtgaccgccgcaaggccatgctgggcgacatcggcatcctgaccggtgcccaggtcatc
agcgaggacctcggcctcaagctggagtccaccacgctggaccagctcggccgcgcccgc
caggtcatcgtcaccaaggacgagaccaccatcgtcgacggtggcggcgacgccgagcag
atcgccggccgggtcaaccagatccgcgccgagatcgacaacaccgactccgactacgac
cgcgagaagctccaggagcgtctggccaagctggccggcggcgtggccgtcatcaaggcc
ggcgcggcgaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgttcgc
aacgcgaaggcggccgtcgaggagggcatcgtccccggcggtggcgtggccctgctgcag
gccggcgccaaggcgttcgacaagctggagctgtccggcgacgaggccaccggtgccgcg
atcgtgaagaaggctcttgaggagccgctgaagcagatcgccgtcaacgccggccttgag
ggcggcgtcgtggtggagaaggtgcgcaacctcaccccgggtgagggcctgaacgccgcc
accggcgagtacgtcaacatgttcgagtcgggcatcatcgacccggccaaggtgacgcgc
tccgcgctgcagaacgccgcttccatcgcggcgctcttcctcaccaccgaggccgtcatc
gccgagaagcccgagaaggccggagccgctcccgccatgccgggcggcggcgacatggac
ttctag
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integrated database retrieval system
