Streptosporangium roseum: Sros_5632
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Entry
Sros_5632 CDS
T01137
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sro
Streptosporangium roseum
Pathway
sro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sros_5632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sro03019
]
Sros_5632
03400 DNA repair and recombination proteins [BR:
sro03400
]
Sros_5632
Enzymes [BR:
sro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sros_5632
Messenger RNA biogenesis [BR:
sro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sros_5632
DNA repair and recombination proteins [BR:
sro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sros_5632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
AAA_30
MarR_2
HEM4
T4SS-DNA_transf
DUF7343
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
ACZ88384
UniProt:
D2AR43
LinkDB
All DBs
Position
complement(6167867..6169504)
Genome browser
AA seq
545 aa
AA seq
DB search
MGVRDGFGLRARRLRAVARKVFGWRDLRPGQLEAMRHLLGGGDALVVMPTGSGKSAVYQV
PALLLDGPTVVVSPLIALQRDQVAGLREADAGGAVAVNSAQSGTEASLESVRAGTTEFVF
LSPEQLARPETVERLRAARPSLIAIDEAHCVSAWGHDFRPDYLRLGQVIERLGHPPVVAL
TATATPSVREEIVTALGLSDVRQIVRGFDRPNLDLEVRRFVTQEDLRRALVEDAASRPGL
GLVYVATRRAAEEYAAALREAGRRVEPYHAGMKAADRHRVHGMFRDDELDVVVATSAFGM
GIDKPDVRFVLHAAPPESPDSYYQEIGRAGRDQAPASAVLFYRPEDLGLRRFFAGGRADE
ELLLRTATLIHEHGGAVPAADLRAVLDVGATRLTRVVNLLERAGAVEVTGEGDLRQVSGG
PAPREATARAVELDDTRRRIDDSRIDMMRGYAETTGCRRRFLLEYFGEPYERTCGDCDTC
RAGLSAPPETGGGPFPMHAGVRHSSWGAGVVMSREADRITVLFDEVGYKTLSLEAVERDG
LLEAC
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgagggacggcttcgggctgcgggcgcggcggctgagggcggtggcccgcaag
gtcttcgggtggcgggacctgcggccggggcagctcgaagccatgcgacacctgctgggc
ggcggcgacgcgctcgtggtcatgccgaccggcagcggcaagtcggccgtctaccaggtg
ccggccctgctgctggacgggccgacggtggtcgtctcgccgctgatcgcgctccagcgc
gaccaggtcgccgggctgcgggaggccgacgccggcggggcggtcgcggtcaactccgcg
cagtccggcaccgaggcctcccttgagtcggtgcgggcgggcacgaccgagttcgtcttc
ctctctcccgagcagctcgccaggcccgagacggtcgagcggctgcgtgccgcccgcccc
tcgctgatcgccatcgacgaggcccactgcgtgtccgcgtggggacacgacttccggccc
gactacctgcgcctgggacaggtcatcgagcggctcggccacccgccggtggtggcgctg
accgccacggcgaccccgtcggtccgcgaggagatcgtcacggccctgggcctgtcggac
gtccgccagatcgtgcgcggcttcgaccgtcccaacctggacctggaggtccgccggttc
gtcacccaggaggacctgcggcgggcgctggtggaggacgccgcctcccgtcccgggctc
gggctggtctacgtcgccacccgccgcgccgccgaggagtacgccgccgcgctgcgggag
gcgggccgccgggtcgagccgtaccacgcggggatgaaggccgccgaccgccaccgcgtc
cacgggatgttccgcgacgacgagctcgatgtcgtcgtggcgacctcggcgttcggcatg
ggcatcgacaagccggatgtgcggttcgtgctgcacgccgccccgccggagtcaccggac
tcctactaccaggagatcggccgcgccggccgggaccaggccccggcctccgcggtgctg
ttctaccggccggaggatctcgggctgcgcaggttcttcgccgggggacgggccgacgag
gagctcctgctgcggaccgccacgctgatccacgaacacgggggcgccgttccggccgcc
gatctgcgcgccgtactggacgtcggcgccacccgcctgacccgggtggtgaacctgctg
gagcgggccggcgcggtcgaggtcaccggggagggggacctgcgccaggtctccggcggc
ccggcgccgcgggaggccaccgcgcgcgccgtcgaactcgacgacacccgccgccgcatc
gacgactcccgcatcgacatgatgcgcggctacgccgagaccaccggctgccgccgcagg
ttcctgctggagtacttcggcgagccgtacgagcgcacctgcggagactgcgacacctgc
cgggcgggtctgtccgccccgccggagaccggcggcggccccttcccgatgcacgccggc
gtacggcacagcagctggggcgccggggtggtgatgagcagggaggccgaccggatcacc
gtcctgttcgacgaggtcggctacaagacgctctccctggaggccgtcgagcgcgacggc
ctcctggaggcctgctag
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