Streptosporangium roseum: Sros_6451
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Entry
Sros_6451 CDS
T01137
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sro
Streptosporangium roseum
Brite
KEGG Orthology (KO) [BR:
sro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sro03400
]
Sros_6451
DNA repair and recombination proteins [BR:
sro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sros_6451
Archaeal homologous recombinant proteins
Sros_6451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
nSTAND3
AAA_22
ABC_tran
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACZ89165
UniProt:
D2B0F9
LinkDB
All DBs
Position
complement(7065752..7069627)
Genome browser
AA seq
1291 aa
AA seq
DB search
MRPHRLWISAFGSFPAEEEVDFDALAEAGLFLIHGPTGAGKTTVLDALCYALYGRVPGKR
DSAKSLRCDHAPPGRGPSVALEVTIRGRRLKITRSPAWQRPKLRGTGTTRENEKALLQEL
TPSGEWTGLTTRVDEAGELIGTLLGMNAEQFFQVAMLPQGDFAKFLRADGEDRRRVLERL
FSVRIYAAAESWLADRRTEAHREQQALRKEVDFAVKRLEEAAGPGLLASLAGAASPQPPG
SAEAGAAGLFELPEGDAGPSAVAVSAEDDPLEWARTLEELAAEEVAGMSRGHGEGEEAVR
QARARLAHGVALAERRRRHAEALTRSRALEESAEERADLETILAEAARADRVLPLIQAAE
QRAEAAAKAHRLAADAVARALPLLRDGRDTTPDRLATLERDRHREITRLGELRAEESRLA
KILQDREESGREITGLTAAQAGTDARLAVLPGLRRDVDARLTAARLDAARIPAAESAGEG
AAARLRAAEHRDGLAAALAAARHDLAARLRALPALADGAGVPAVREGAEVRELLASWERE
RREESAGLEGLRADEARLAELAGLLAALDVELREAAGQESALREAQEALPAALADASARL
AAVRAQAAGIPAAQAAADAAAAGLDAARRRDALRVELESARAAQTEATDHAQRLRDRHLD
LRQARIDGMAAELALKLAPGEPCAVCGSPDHPAPAAPADAAPTAEDERAAQSAYDTATDR
RRTAESAVAALASRLEEALAVAGELGADHAREALAEAGRELAALTAAAGTEAALSAEADR
VAAELEGVKARAAETARLLAEGRTRRAGWLAERDRLAGRLDEARGADPTVQARRDRLTGE
ASLLAAALTAAVRTAELESGHREAAERTDLTLELAARELREAELALARLRESAGAEPALV
AEADRIAAEQGELEERSREFAVTLAARRTDVDRLTAETERLTARIDGARGEDPTLAARLE
RLADEAELLKEAVEATREELTTATELAAARDRAEAAVAEAGFLGPDDARAAARPPAEQEE
KAERLRELDKERAAVAAVLADPELIAAAAEDEPDLDALQRARDAADAAHAGLLSARHQAE
TRRARLAALRAELAECLERWLPAAGRHRLADRLAALTGGNSTDNQWNMRLSSYVLGERLR
QVVESANERLDHMSGGRYLLEHHLSRSAGDRSKSGGGLGLRILDGWTGVDRDPATLSGGE
SFVTSLALALGLADVVTAEAGGVELGTLFVDEGFGTLDEDTLDGVLDILDGLRDGGRAVG
IVSHVAELRTRVPAQLRVRKERHGSTLSTVT
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgcaccgtctgtggatcagcgcgttcggctccttccccgccgaggaggaggtc
gacttcgacgccctggccgaggccgggctgttcctcatccacggccccaccggcgcgggc
aagaccaccgtgctggacgcgctctgctacgccctgtacggcagggtgccgggcaagcgc
gacagcgccaagagcctgcgctgcgaccacgcgcccccgggccgggggcccagcgtggcg
ctggaggtcacgatcaggggccggcggctgaagatcactcgatcgccggcctggcagcgc
cctaagctcaggggcaccggcaccacgagggagaacgagaaggccctgctgcaggagctc
acgccttcgggggagtggaccgggctgaccacgcgggtcgacgaggccggagagctcatc
ggcaccctgctgggcatgaacgccgagcagttcttccaggtcgcgatgttgccccagggg
gatttcgcgaagttcctgcgcgccgacggcgaggaccgccgcagggtcctcgaacggctc
ttctccgtgaggatctacgccgccgccgagtcctggctcgccgaccggcggaccgaggcc
caccgcgagcagcaggccctccgcaaggaggtggacttcgcggtcaagcgcctggaggag
gccgcgggccccggcctcctcgcgtcgctggcaggggccgcctccccgcagccccccggt
tccgcggaggccggagcggccgggctgttcgagctccccgagggcgacgccgggccgtcc
gcggtggcggtctccgcggaggacgatccgctggagtgggcccggacgctggaggagctg
gccgccgaggaggtcgccgggatgagccggggccacggcgagggcgaggaggcggtacgg
caggcacgcgcgaggctggcgcacggcgtcgcgctggccgagaggcggcgccgtcacgcc
gaggcgctgacgcggagccgggcgctggaggagagcgccgaggagcgggcggatctggag
accatcctggcggaggcggcccgcgccgaccgggtgctgcccctgatccaggccgccgag
cagcgggccgaggcggcggccaaggcccaccggctggccgccgacgccgtcgcccgtgcc
ctccccctcctccgtgacggccgcgacaccaccccggaccgtctggccacgctggagcgc
gaccggcaccgcgagatcacccggctgggcgagctgcgcgccgaggagtcacgcctggcg
aagatcctccaggaccgggaggagtccggccgtgagatcaccgggctgaccgccgcgcag
gccgggaccgacgcccgcctggcggtccttcccgggctccgccgcgacgtggacgcccgc
ctcacggccgcccgcctggacgccgcccgcatcccggccgccgagtccgccggggagggc
gcggccgcccgcctgcgggccgccgagcaccgcgacggcctcgccgccgcgctggccgcc
gcccgccacgacctggctgccaggctccgcgccctgcctgccctcgcggacggcgccggc
gtgcccgccgtccgcgagggggccgaggtccgcgagctgctggcctcctgggagcgcgag
cgcagggaggagagcgccgggctggaggggttgcgcgccgacgaggcccggctcgccgag
ctggccgggctgctcgccgcgctcgacgtcgagctgcgggaggcggccgggcaggagtcc
gcgctccgcgaggcccaggaggcgctgcccgccgcactggcggacgcctcggcgcgcctg
gcggcggtcagagcgcaggcggccgggatccccgccgcccaggcggccgccgacgccgcc
gccgccgggctcgacgccgcccggcggcgtgacgccctccgcgtcgagctggagtccgcg
cgcgcggcccagaccgaggccaccgaccacgcccagcgtctccgcgaccgccacctggac
ctccgccaggccaggatcgacggcatggccgccgagctcgccctcaagctcgccccgggc
gagccctgcgcggtctgcggctcacccgaccacccggcccccgccgcccccgccgacgcg
gcgcccaccgccgaggacgaacgcgccgcccagagcgcctacgacaccgccacggaccgg
cgccggaccgccgagagcgccgtcgcggccctggcctcgcggctggaggaggcgctcgcc
gtcgcgggcgagctgggcgccgaccacgcgcgggaggctctcgccgaggccggacgggag
ctggcggccctgaccgccgccgccggcaccgaggcggcgctcagcgcggaggcggaccgc
gtcgcggccgagctggaaggcgtgaaggcacgggccgcggagacggcccggctgctggcc
gagggccgtacccgccgggccggatggctggccgagcgcgaccggctggccggccgtctg
gacgaggcccgtggcgccgaccccaccgtccaggcccgccgcgaccgcctcaccggggag
gcgtccctcctcgccgccgccctcaccgctgccgtccgcaccgccgagctggaatccggc
caccgagaggcggccgagaggaccgatctcaccctggagctggcggcacgcgagctccgg
gaggccgagctggccctggccaggctgcgggagtcggccggggccgagcccgcgctggtg
gccgaggccgaccggatcgcggccgagcagggagagctggaggagcgctcgcgcgagttc
gcggtcacgctggccgcccgccgtacggacgtggacaggctcaccgccgagaccgagcgg
ctgaccgcgcgcatcgacggggcccggggcgaggacccgaccctggccgccaggctggag
cggctggcggacgaggccgagctgctcaaggaggcggtcgaggccacccgggaggagctg
accaccgccaccgagctggcggcggcccgggaccgggccgaggccgccgtcgccgaggcg
ggcttcctcgggcccgacgacgcccgcgcggcggcccgccctcccgccgagcaggaggag
aaggccgaacggctccgcgagctcgacaaggagcgcgccgcggtcgccgcggtgctggcc
gatccggagctgatcgccgccgcggccgaggacgagcccgacctcgacgctctgcagcgc
gcgcgggacgccgccgacgcggcccacgccggcctgctctccgcccggcaccaggccgag
acccgccgggcccggctggccgcgctccgcgccgagctggccgagtgcctggagcgctgg
ctgcccgccgccggacggcaccgcctcgccgaccggctcgcggccctcacggggggaaac
tccaccgacaaccagtggaacatgcggctgtcgtcctacgtgctcggcgagcgcctgcgc
caggtggtcgagtcggccaacgagcggctcgaccacatgtcgggcggacgctacctcctc
gaacaccacctcagccgttcggcgggagaccggagcaagtcgggcggagggctcggcctg
cggatcctggacggctggaccggggtggaccgcgatccggccaccctgtccggcggcgag
agcttcgtcacctcgctggcgctcgccctcggcctggccgacgtggtgaccgccgaggcc
gggggagtggagctcggcacgctcttcgtcgacgagggcttcggcaccctggacgaggac
accctcgacggggtgctcgacatcctcgacggcctgcgcgacggcggccgggccgtcggc
atcgtcagccacgtcgccgagctgcgcacccgcgtccccgcccagctgcgggtccgcaag
gaacgccacggctccaccctgtccacggtcacctga
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