Streptosporangium roseum: Sros_7074
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Entry
Sros_7074 CDS
T01137
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sro
Streptosporangium roseum
Pathway
sro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sros_7074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sro03019
]
Sros_7074
03400 DNA repair and recombination proteins [BR:
sro03400
]
Sros_7074
Enzymes [BR:
sro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sros_7074
Messenger RNA biogenesis [BR:
sro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sros_7074
DNA repair and recombination proteins [BR:
sro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sros_7074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
AAA_22
PglZ_C
Cas3-like_C_2
Pribosyltran
HVO_A0261_N
HEM4
Motif
Other DBs
NCBI-ProteinID:
ACZ89772
UniProt:
D2B916
LinkDB
All DBs
Position
complement(7799474..7801543)
Genome browser
AA seq
689 aa
AA seq
DB search
MLREEAEGRLRALAGEHARLREDQWAAIKALVMDRRRVLVVQRTGWGKSAVYFIATALLR
ELGEGPTVIVSPLLALMRNQIAAAERAGINAVTINSANPEEWEQIYGQVAEGMVDVLLVS
PERLNNPDFRDQVLPELAESAGLVVVDEAHCISDWGHDFRPDYRRLRTMFEELPEGVPIL
ATTATANARVTHDVAEQMGEETLVLRGALERESLHLGVVRLRGAEQRLAWLAQTLHELPG
SGIIYTLTVAAAQEIAAYLREQGHEVAAYSGQTEQAERLAAEQALLDNKIKALVATSALG
MGYDKPDLGFVVHVGAPQSPVAYYQQVGRAGRGVERAEVILLPGAEDREIWAYFASLAFP
PEPVVRTVLAALEEGGVLSTAALENRVDLSRTRLETMLKVLDVDGAVRRVKGGWEATGEA
WGYDADRYARVAAEREAEQRAMLDYLDSTECREMFLRHRLDDDTATPCGRCDNCTGAHRS
PEVEERAVERAAESLHRPGVEVEARKQWPTGLTDLKGRIKPELGAEPGRALGRLTDIGWG
NRLRGLLAEGAPDGPVPDDVFAAVVKVLSSWEWTQRPIAVVAMPSAGRPQLVRSLAERLA
QVGRLSYLGDLGYRSGPPGRQFNSAQRVQAIRGTLAMPSALGAAIAGAGGPVLLVDDRVD
TGWSMTLAAAMIRHAGAPAVLPLALAVTS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgagaagaggccgaagggcggctgcgggcgctggcgggcgagcacgcccggctg
cgcgaggaccagtgggcggcgatcaaggcgttggtcatggaccgccgccgggtgctcgtg
gtgcagcggaccggctggggcaagtcggcggtctacttcatcgccaccgcgctcctgcgc
gagctgggcgaggggccgaccgtcatcgtgtcgccgctgctggcgctgatgcgcaaccag
atcgccgccgccgagcgggccgggatcaacgcggtcacgatcaactcggccaaccccgag
gagtgggagcagatctacggtcaggtcgccgagggcatggtcgacgtgctgctggtcagc
cccgaacggctcaacaaccccgacttccgcgaccaggtcctgcccgagctggccgagagc
gccgggctggtcgtggtggacgaggcgcactgcatctccgactggggccacgacttccgc
cccgactaccgccggctgcgcacgatgttcgaggagctgcccgagggcgtgccgatcctg
gccaccaccgccacggccaacgcccgggtcacccacgacgtcgccgagcagatgggcgag
gagacactcgtcctgcgcggggcgctggagcgcgaaagcctccatctgggtgtcgtacgg
ctgcgcggcgccgagcagcgcctggcctggctcgcccagaccctgcacgagctgcccggc
tccgggatcatctacacgctcaccgtggccgccgcccaggagatcgccgcctacctgcgc
gagcaggggcacgaggtggcggcctactccgggcagaccgaacaggccgagcggctcgcc
gccgaacaggccctgctcgacaacaagatcaaggcgctggtcgccacctccgcgctgggc
atgggatacgacaagcccgacctcggcttcgtcgtccacgtcggcgcgccgcagtcgccg
gtggcctactaccagcaggtcggccgggcggggcgcggggtcgagcgggccgaggtgatc
ctgctgcccggcgccgaggaccgggagatctgggcctacttcgcctccctggccttcccg
cccgagccggtcgtgcggaccgtgctcgccgcccttgaggaggggggcgtgctgtccacg
gccgcgctggagaacagggtggacctcagccgcacccggctggagaccatgctcaaggtg
ctcgacgtggacggcgcggtgcgccgggtcaagggcggctgggaggccaccggtgaggcc
tggggttacgacgccgaccgctatgcccgggtcgccgcggagcgcgaggccgagcagcgg
gccatgctcgactacctcgacagcaccgagtgccgggagatgttcctccgccaccgcctg
gacgacgacaccgccacgccgtgcgggcggtgcgacaactgcacgggcgcgcaccgctcg
cccgaggtcgaggagcgggcggtggagcgcgccgccgagagcctgcatcggcccggcgtg
gaggtcgaggcgcgaaagcagtggccgaccgggctgaccgacctcaagggccggatcaag
cccgagctgggcgccgagcccggccgcgccctggggcggctgaccgacatcggctggggc
aaccgcctgcgcggcctcctggccgagggtgcccccgacggcccggtccccgacgacgtc
ttcgccgcggtggtcaaggtgctgtcgtcctgggagtggacccagcgcccgatcgcggtg
gtcgcgatgccctccgcgggccgcccccagctcgtccgcagcctcgccgagcggctggcc
caggtcgggcgcctgtcctatctgggcgacctcggataccgttcgggtccgcccggacgc
cagttcaacagcgcgcagcgcgtccaggccatccgcggcacgctcgccatgccctcggcg
ctcggtgccgccatcgcaggggcgggcggcccggtcctgctggtcgacgaccgcgtcgac
accggctggagcatgacgctcgccgccgccatgatccgccacgccggggcccccgccgtg
ctgccgctcgccctggcggtgacgagttag
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