Streptosporangium roseum: Sros_8376
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Entry
Sros_8376 CDS
T01137
Name
(GenBank) Superfamily I DNA and RNA helicase-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sro
Streptosporangium roseum
Pathway
sro03420
Nucleotide excision repair
sro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sros_8376
03430 Mismatch repair
Sros_8376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sro03400
]
Sros_8376
Enzymes [BR:
sro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sros_8376
DNA repair and recombination proteins [BR:
sro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sros_8376
MMR (mismatch excision repair)
Other MMR factors
Sros_8376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACZ91021
UniProt:
D2B0K9
LinkDB
All DBs
Position
complement(9241637..9245323)
Genome browser
AA seq
1228 aa
AA seq
DB search
MLSPIQLAAKLGILPPTPEQAEVIEAGLEPMVVVAGAGSGKSETMAGRVVWLVANGLVRP
EQVLGLTFTRKAAGELAIRVRERLNGLVAAEQVPAELLEGEPTISTYHAYAARLVTDHAL
REALEPTMRLVSPAVSWQLAVRVVSAYDGPMEQIEWGPATVTRAVLELAGELSEHLRGPQ
DVREVGAWLADRYGELPGSPTLPQRRPLATQRAREQLLPLVEAYDRLKRSREVVDHGDQM
ALAARIAAKHAEVGEIERGRFAVVLLDEYQDTSHAQLVLLRSLFGGGHPVTAVGDPCQSI
YGWRGASAGNLTRFPRDFTTASGELAPVRRLSISFRNGDAVLDVAARVQLPLRMEAREVP
VLVPGGNRVERGRVVCAFHETADDEAAWVADGIARVLGGESAPDGMPWGEGERKKAKQSA
WGGPQCLQPHDVAILARKRSQFPALRRALEERGIPVEVVGLGGLLTVPEVSDIVATLRVL
YDPTAGDALVRLLSGPRWRIGPADLKELGERARELNRETREGGSMASDPLDQVVADMAEE
RGSLIDALDELPDRPEWQDLFSPLARVRLLAMAQELRILRAHTGQPLPDLIIEIERRLGL
DIEVAARGTAIGPFAARADLDAFLDAAARFAGDSEDPTLGAFLAFLKAADEEENGLDAGR
VGESNSVKLMTIHASKGLEWPVVVIPGMSQALSKAGTLTVGTMFPARPTTSPKWTDNPRK
LPYPLRGDASDLPRLGGLSKEELAEFDERCRDRDLLEERRLAYVAVTRAHYLLIASGYRW
GSAAKPLEPSDFLVEIRETCGRVSVWAPEAGEGATNPLLAEPAEAGWPVTPDGLRYEAVL
DGATMVEAALAALAGQGGDPAASRPRDGSAQAPGAENAPFSDFSDIPFPDVPPEDEEVPF
PEAPEDEDVLFLEVPEFFDDPDDEEATSRARQDVSAEAVHEAVHEAVHEGGRVPGEEPGN
GHVLPEGEPGPEHRRVPEEGQEPGNERAGALADLRGWDKERAKAWERDTELLLRERAVNR
RRGGGQVELPTHLTVSSLVTLASDPKTLARQVRRPVPRKPTPLARRGTSFHRWLESRWGQ
QRLLDEMELPGSSDGFEETDIQLDQLRDRFEESEWAGREPLDVEVPFETMIADRLVRGRM
DAVFELPDGRYEVVDWKTGQRPEGKKAEAAAAVQLAAYRLAWSHLADVPLAQVSAAFHFV
RLNETVRPVNLLDERGLVRLIESIPALG
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
gtgctgagcccgatccagctcgccgccaagctgggcatccttccccccacccccgaacag
gccgaggtgatcgaggccggtctcgaacccatggtcgtggtcgccggagccgggtcgggc
aagagcgagaccatggccgggcgggtcgtctggctggtggccaacggcctcgtccgcccc
gaacaggtgctcggcctgaccttcaccaggaaggccgccggcgagctggccatccgggtc
cgcgagcggctcaacggcctcgtcgcggccgagcaggtccccgccgagctgctggagggc
gagccgaccatctcgacctaccacgcctacgcagccaggctggtcaccgaccatgccctg
cgtgaggcgctggagcccaccatgcgcctggtcagcccggccgtctcctggcagctcgcc
gtgcgggtggtcagcgcctacgacgggcccatggagcagatcgagtggggtccggccacc
gtcacccgggcggtgctggagctggccggggagctgtccgagcacctgcgcggcccgcag
gacgtgcgggaggtcggcgcctggctcgccgaccggtacggcgagctgcccggctcgccc
accctgccccagcgcaggccgctggccacccagcgggccagggagcagctcctgccgctg
gtcgaggcctacgaccggctcaaacggagccgtgaggtcgtcgaccacggcgaccagatg
gcgctggccgcccggatcgccgccaagcacgccgaggtcggcgagatcgagcggggccgg
ttcgccgtcgtcctcctcgacgagtaccaggacaccagccacgcccagctcgtcctgctc
cgctcgctgttcggcggaggtcacccggtgaccgccgtgggcgacccctgccagtccatc
tacggctggcgcggcgcctcggcgggcaacctcacccgcttcccccgcgacttcacgacc
gcctcgggggaacttgcgccggtccgccgcctgtcgatcagcttccgcaacggcgacgcc
gtactggacgtcgccgcccgggtgcagctcccgctccggatggaggcgcgggaggtgccg
gtgctggtgcccggcggcaaccgggtcgagcgcggccgggtggtgtgcgccttccacgag
accgccgacgacgaggcggcgtgggtcgccgacgggatcgccagggtgctgggcggtgag
agcgcgcccgacggcatgccgtggggtgagggcgagcggaagaaggccaagcagagcgcg
tggggcggcccgcagtgcctgcagccgcacgacgtggcgatcctggcccgcaagcggtcg
cagttccccgcgctgcgccgggcgctggaggagcgggggatcccggtcgaggtggtcggc
ctggggggcctgctgaccgtgccggaggtctccgacatcgtcgccaccctgcgcgtgctc
tacgacccgaccgcgggcgacgcgctggtccggctgctgtccggtccccggtggcggatc
ggcccggccgacctgaaggagctgggcgagcgggcgcgtgagctgaaccgtgagacccgg
gagggcggatccatggcgtccgacccgctggaccaggtcgtggcggacatggccgaggag
cgcggcagcctgatcgacgccctcgacgagctgcccgaccgtcccgagtggcaggacctg
ttctcacccctggcccgggtacggctgctcgccatggcgcaggagctgcggatcctgcgc
gcccacaccggccagccgctccccgacctgatcatcgagatcgagcggaggctcggcctg
gacatcgaggtggcggcgcgggggacggccatcgggccgttcgccgcccgggccgatctg
gacgccttcctcgacgcggccgcccggttcgcgggcgactccgaggatccgacgctgggc
gcgttcctcgccttcctcaaggcggccgacgaggaggagaacggcctggacgccgggcgg
gtgggggagagcaacagcgtcaagctgatgaccatccacgcctccaagggcctggagtgg
ccggtcgtcgtgatccccggcatgtcccaggcgctgtccaaggccggcaccctgaccgtc
ggcacgatgttcccggcccgcccgacgaccagccccaagtggacggacaacccgcgcaag
ctgccctacccgctccgcggcgacgcctccgacctgccccggctgggcgggctgagcaag
gaggagctggcggagttcgacgagcgctgccgtgaccgcgatctgctggaggagcgccgc
ctggcctacgtggccgtcacccgcgcccactacctcctgatcgcctccggctaccgctgg
ggcagcgcggccaagcccctggagccctccgacttcctggtggagatccgcgagacctgc
gggcgcgtctccgtctgggcgcccgaggccggcgagggcgccaccaaccccctgctcgcc
gaacccgccgaggccggctggcccgtcacccccgacggcctccgctacgaggccgtcctc
gacggggccaccatggtcgaggccgccctcgccgccctcgccgggcagggcggcgacccg
gccgcctcccgccctcgggacggttccgcccaggctcccggagccgagaacgcccccttt
tccgatttttccgatatccccttccctgacgtccctccggaggacgaggaggttcccttc
cccgaggcgcccgaggacgaggacgtcctcttcctggaggtcccggagttcttcgacgac
ccggacgacgaggaggccacttctcgcgctcggcaggacgtctcggccgaggccgtacac
gaggccgtgcacgaggccgtgcatgagggcgggcgcgtgcccggggaggagccggggaac
gggcatgtgctgcccgagggggagccgggaccggagcaccggcgggttcccgaggagggg
caggagccggggaacgagcgcgccggtgccctcgcggacttgcgcggctgggacaaagag
cgggcgaaggcctgggagcgcgacaccgagctcctgctcagggagcgggccgtgaaccgg
cggcgcggtggcgggcaggtcgagctgcccacccatctgaccgtctcgtcgctggtcacc
ctggcctccgatcccaagaccctggcccggcaggtccgccgcccggtgcccaggaagccc
accccgctggcccgccggggcacctccttccaccgctggctggagtcgcggtggggtcag
cagcggctgctcgacgagatggagctgccgggctcgtccgacggcttcgaggagaccgac
atccagctcgaccagctgcgtgaccggttcgaggagagcgagtgggccggccgggaaccg
ctggacgtcgaggtccccttcgagacgatgatcgccgaccggctggtccggggccggatg
gacgcggtgttcgagctcccggacggccgctacgaggtcgtcgactggaagacgggtcag
cgtcccgagggcaagaaggccgaggccgccgcggcggtccagctcgccgcctaccgtctg
gcctggtcccacctggccgacgtccccctcgcccaggtgagcgccgccttccacttcgtc
cgcctcaacgagacggtcaggccggtcaacctcctcgacgagcggggcctggtcaggctc
atcgagtcgatccctgccctcggctga
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