Streptomyces roseicoloratus: RGF97_07565
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Entry
RGF97_07565 CDS
T09671
Name
(GenBank) HAMP domain-containing protein
Organism
sroc
Streptomyces roseicoloratus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
CovS-like_HAMP
RNase_Y_N
GAF_3
OmpH
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
WMX44739
LinkDB
All DBs
Position
complement(1696015..1701480)
Genome browser
AA seq
1821 aa
AA seq
DB search
MESGTTTRRGGGSRPKGGGRSRGAGTVQVDAAALERLLAALVSMRDGNFRKRLTVSGDGM
MAEIAAVFNEVADRQSHLTGEFARVRRVVGREGKLSERLEAGAAEGSWAATIEAANALVD
ELARPVSEVGRVLSAVAEGDLGQRMELRSEGGDGSTRPLRGEFLKVARTVNNLVDQLSVF
ADEVTRVALEVGTEGILGGQAQVRGMSGSWKDLTDSVNTMANRLTAQVRDIALVTTAVAN
GDLSQKVTANVAGEMLELKNTVNRMVDQLSSFSSEVTRVAREVGTEGELGGQAEVAGVAG
VWKDLTDSVNTMAGNLTNQVRGIAEVTTAVANGDLSQKVRVSARGEIAQLADTINQMTET
LRTFADEVTRVSGEVGAQGLLGGQAQVPGAAGTWKDLTDSVNTVFRNITTQVRDIAQVTT
AVANGDLSQKVTVDVAGEMLELKNTVNTMVDQLSAFGSEVTRVAREVGVEGRLGGQAQVP
GAAGTWKDLTDSVNTAFRNLTGQVRDIAQVTTAVANGDLSQKVTVDVAGEMLELKNTVNT
MVSQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGRWRELTDSVNFMAGNLTSQVRQIA
QVTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSAFADQVTRVAREVGTDGRLGGQ
AVVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDLSQKIDVDARGEILELKN
TLNTMVDQLSSFADQVTRVAREVGTEGILGGQAEVQGVSGTWKDLTQSVNMMANNLTFQV
RNIAEVTTAVAKGDLSKKITVDAKGEILELVTTVNTMVDQLSNFADEVTRVAREVGTEGI
LGGQARVRGVTGIWKDLSDNVNLMANNLTSQVRNISRVSAAVANGDLTKKVTVEARGEVA
ELADTVNTMVTTLSSFADEVTRVAREVGTEGELGGQARVPGVSGTWKDLTESVNSMASNL
TGQVRQIAAVTTAIAKGDLTKKIDIDAQGEILELKNTINTMVDQLSNFAEEVTRVAREVG
TDGQLGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIAAVATAVTRGDLNLKIDGVDA
AGEIQALQDNINTMIANLRDTTLANEEQDWLKGNLARISGLMQGRRDLDDVASLIMSELT
PVVSAQHGAFFVAMPTGANAGDAEAVGEGEGSYELRMRGSYGYSAGSMPTSFRPGETLIG
TAAEEKRTIQVNVPPGYLKISSGLGEAAPAHVIVLPVLFEGRVLGVIELASFQPFTQIQR
DFLNQIAELIATTVNTISVNTRTEVLLQQSQELTEQLRERSAELEHRQKELQNSNAELED
KAELLARQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLI
LAKLLADNADANLTPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQ
LVDYVEATFRPLTAEKGLDFSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDTGAVE
LVIRPAGADVPQSIREQLLEAGTLRDPEAELIAFSVTDTGIGIAAGKMRVIFEAFKQADG
TTSRKYGGTGLGLSISREIARLLGGEIYAASEPGRGSTFTLYLPLSPVEPVSSGPAPDQT
DPEDRFGAEADAAGDLVHFAPAPAHTEARAGTGALFRHRRKSVDQLPPVPGQPGKGDLTA
DEERPEPVAGPVFTFAGEKVLIVDDDIRNVFALTSVLEQHGLAVLYAENGREGIEVLEQH
EDVSVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMKGDREKAIESGASDYVT
KPVDPDYLLSVMEQWMRGEGR
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcacgacgacgcggcgcggaggcggttcgcggccgaagggcggcggccgg
tcccggggcgcgggcacggtgcaggtggacgcggcggcgctggagcggttgctggccgct
ctggtgtcgatgcgggacgggaacttccgcaagcggctgaccgtgtccggcgacgggatg
atggccgagatcgcggccgtcttcaacgaggtcgcggaccggcagtcgcatctgaccggg
gagttcgcgcgggtgcgccgggtggtgggccgcgagggcaagctgtcggagcggctggag
gccggggcggcggagggctcctgggcggcgaccatcgaggcggcgaacgcgctggtcgac
gagctggcgcggccggtgtcggaggtcggccgggtgctgtcggcggtggccgaaggcgat
ctggggcagcggatggagctgcgctcggagggcggcgacgggtcgacgcggccgttgcgc
ggggagttcctgaaggtcgcgcggaccgtgaacaacctggtcgaccagctgtcggtgttc
gcggacgaggtgacccgggtcgcgttggaggtgggcaccgagggcatcctgggcggtcag
gctcaggtgcgcggtatgtccggttcgtggaaggacctgacggactcggtcaacaccatg
gcgaaccggctgacggcccaggtgcgggacatcgccctggtcacgacggcggtggccaac
ggtgacctgtcgcagaaggtcacggcgaacgtggccggcgagatgctggagctgaagaac
accgtcaaccggatggtggaccagctctcctcgttctcgtccgaggtgacccgggtggcc
cgcgaggtgggcacggagggcgagctgggcggtcaggccgaggtggccggcgtcgccggt
gtgtggaaggacctcacggactccgtcaacacgatggcgggaaatctcaccaatcaggtg
aggggcatcgccgaggtcacgacggcggtggccaacggcgacctgtcgcagaaggtgcgg
gtgtcggcgcgcggggagatcgcccagctcgcggacaccatcaaccagatgacggagacc
ctgcggaccttcgcggacgaggtgacgcgcgtctcgggcgaggtcggcgcgcagggtctg
ctcggcggtcaggcgcaggtgccgggtgcggcgggcacgtggaaggacctgacggactcg
gtcaacaccgtcttccggaacatcaccacgcaggtgcgggacatcgcgcaggtgacgacg
gcggtggcgaacggtgacctgtcgcagaaggtcacggtggacgtggccggcgagatgctg
gagctgaagaacaccgtcaacacgatggtggaccagctgtcggcgttcggttccgaggtg
acccgggtggcgcgggaggtcggcgtcgagggccggctcggcggccaggcgcaggtgccg
ggcgcggcgggcacgtggaaggacctcaccgactcggtgaacacggcgttccgcaacctc
accggtcaggtgcgggacatcgcgcaggtgacgacggcggtggcgaacggcgacctgtcg
cagaaggtcaccgtggacgtggccggcgagatgctggagctgaagaacaccgtcaacacg
atggtgtcgcagctgtcctcgttcgccgaccaggtgacgcggatggccagggacgtgggc
acggagggccggctcggcggccaggcccgggtggacggtgtgtccgggcgctggcgggag
ctcaccgactcggtgaacttcatggccggcaacctgacgtcgcaggtgcggcagatcgcc
caggtgacgacggcggtggcgcggggcgacctgtcgcagaagatcgacgtggacgcgcgc
ggcgagatcctggagctgaagaacaccatcaacacgatggtcgaccagctgtccgcgttc
gcggaccaggtgacgcgggtggcccgcgaggtgggcaccgacgggcgtctgggcggtcag
gccgtggtgccgggcgtggccggtgtgtggcgtgacctgacggactcggtgaacggcatg
gccgggaacctgaccgcccaggtgcgcaacatcgcgcaggtcgcgacggcggtggcgcgg
ggtgacctgtcgcagaagatcgacgtggacgcgcgcggcgagatcctggagctgaagaac
accctcaacacgatggtcgaccagctgtccagcttcgccgaccaggtgacgcgggtggcc
cgcgaggtgggcacggagggcatcctgggcggccaggccgaggtgcagggcgtctccggc
acgtggaaggacctcacccagtcggtgaacatgatggcgaacaacctgaccttccaggtc
cggaacatcgccgaggtcaccaccgcggtcgccaagggcgacctgtcgaagaagatcacc
gtcgacgccaagggcgagatcctggagctggtgacgaccgtcaacacgatggtcgaccag
ctgtcgaacttcgccgacgaggtgacccgggtggcccgcgaggtgggcaccgagggcatc
ctgggcggccaggcgcgggtgcgcggggtgaccggcatctggaaggacctgagcgacaac
gtcaacctgatggccaacaacctgaccagccaggtacggaacatctcccgggtgtccgcg
gcggtcgccaacggcgacctgacgaagaaggtcacggtcgaggcgcgcggcgaggtcgcc
gagctcgccgacacggtcaacacgatggtgacgacgctgtcgtcgttcgccgacgaggtg
acccgggtggcgcgcgaggtgggcaccgagggcgaactgggcggccaggcgcgggtgccg
ggcgtctcgggcacctggaaggacctgacggagtcggtgaactcgatggcgtcgaacctg
acgggtcaggtgcgccagatcgccgccgtcaccaccgccatcgcgaagggcgacctgacc
aagaagatcgacatcgacgcgcagggcgagatcctcgaactgaagaacaccatcaacacg
atggtcgaccagctgtcgaacttcgccgaggaggtcacccgggtggcccgcgaggtgggc
accgacgggcagctgggcggtcaggcccgggtccgtgacgtggacggcacgtggcgggac
ctgacggagtccgtgaacgagatggccgggaacctgacccggcaggtgcgcgccatcgcg
gccgtcgccacggcggtgacccgcggcgacctcaacctgaagatcgacggcgtggacgcg
gccggcgagatccaggcgctccaggacaacatcaacacgatgatcgccaacctgcgcgac
acgaccctcgccaacgaggagcaggactggctgaagggcaacctggcccgcatctccggt
ctgatgcagggccgccgggacctggacgacgtcgcctcgctcatcatgagcgagctgacg
ccggtggtgtcggcgcagcacggcgcgttcttcgtggcgatgccgaccggcgcgaacgcc
ggcgacgccgaggcggtgggggagggcgagggctcgtacgagctgcggatgcgcggcagt
tacggctactccgccggctccatgccgacgtcgttccggccgggcgagaccctgatcggg
acggcggcggaggagaagcggaccatccaggtcaacgtgcccccgggctatctgaagatc
tcctcgggtctgggcgaggccgcgccggcccatgtgatcgtgctgccggtgctgttcgag
ggccgggtgctcggcgtgatcgagctggcctccttccagccgttcacccagatccagcgg
gacttcctcaaccagatcgccgaactgatcgcgacgacggtcaacaccatcagcgtcaac
acccgtaccgaggtgctgctccagcagtcgcaggagctcaccgagcagctgcgggagcgg
tcggcggagctggagcaccggcagaaggagctgcagaactccaacgcggagctggaggac
aaggccgaactcctcgcccggcagaaccgtgacatcgaggtgaagaacaccgagatcgag
gaggcccggcaggtcctggaggagcgtgccgaacagctcgcggtctccatgcgctacaag
tcggagttcctggcgaacatgtcgcacgagctgcgcacgccgctcaactcgctgctgatc
ctggcgaagctgctcgcggacaacgcggacgcgaacctgacgccgaagcaggtcgagttc
gccgagaccatccacggcgcgggttccgacctgctccagctgatcaacgacatcctcgac
ctgtcgaaggtcgaggcgggcaagatggacgtctcgccgacgcggatcgcgctggtgcag
ctcgtggactacgtggaggcgaccttccggccgctgaccgcggagaaggggctggacttc
tcggtacgggtctcgccggaactgcccgcgacgctgcacacggacgagcagcggctcctc
caggtgctgcgcaacctgctgtcgaacgcggtgaagttcaccgacaccggtgccgtggag
ctggtgatccgcccggccggcgcggacgttccgcagtcgatccgggagcagctcctggaa
gcggggacgctgcgcgacccggaggcggagctgatcgccttctcggtgacggacaccggc
atcggcatcgcggccgggaagatgagggtgatcttcgaggcgttcaagcaggccgacggg
acgaccagccggaagtacggcggtacgggcctgggcctgtcgatcagccgggagatcgcg
aggctgctcggcggcgagatctacgcggcgagcgagccgggccgcggctcgacgttcacc
ctgtacctgccgctgagcccggtcgagccggtgtcgtccgggccggcgccggaccagacg
gacccggaggatcggttcggcgccgaggcggacgccgccggtgacctggtgcacttcgcg
cccgcaccggcgcacaccgaggccagggcggggaccggggcgctgttccggcaccgccgc
aagtcggtggaccagctgccaccggtgccggggcagccgggcaagggcgatctgacggcg
gacgaggagcggccggagccggtggcgggtccggtgttcacgttcgcgggtgagaaggtg
ctgatcgtcgacgacgacatccgcaacgtgttcgcgctcaccagcgtcctggagcagcac
ggcctcgcggtgctctacgcggagaacggccgcgagggcatcgaggtcctggagcagcac
gaggacgtgtcggtggtcctgatggacatcatgatgccggagatggacggatacgcgacg
accacggcgatccggcggatgccgcagttcgcgggcctgccgatcatcgccctgacggcc
aaggcgatgaagggcgaccgggagaaggccatcgagtcgggggcctcggactacgtcacc
aagccggtcgacccggactacctgctgtcggtgatggagcagtggatgcggggtgagggg
cgctag
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