Streptomyces roseicoloratus: RGF97_08270
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Entry
RGF97_08270 CDS
T09671
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sroc
Streptomyces roseicoloratus
Pathway
sroc02024
Quorum sensing
sroc03060
Protein export
sroc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RGF97_08270 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RGF97_08270 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGF97_08270 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sroc02044
]
RGF97_08270 (ffh)
Enzymes [BR:
sroc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RGF97_08270 (ffh)
Secretion system [BR:
sroc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RGF97_08270 (ffh)
Eukaryotic Sec-SRP protein
RGF97_08270 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
nSTAND3
cobW
AAA_22
Zeta_toxin
ArsA_ATPase
APS_kinase
MMR_HSR1
AAA_31
AAA_18
AAA_24
AAA_33
TctA
Motif
Other DBs
NCBI-ProteinID:
WMX44851
LinkDB
All DBs
Position
complement(1859252..1860805)
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AA seq
517 aa
AA seq
DB search
MFDTLSDRLAATFKNLRGKGRLSEADIDATAREIRIALLEADVALPVVRAFIKNVKERAV
GAEVSKALNPSQQVIKIVNEELIGILGGETRRLRFAKNPPTVIMLAGLQGAGKTTLAGKL
GLWLKGQGHTPLLVACDLQRPNAVTQLGVVADRAGVGFYGPQPGNGVGDPVQVAKDSIEY
ARSKMHDVVIVDTAGRLGIDQELMQQAADIRDAVSPDEVLFVVDAMIGQDAVNTAEAFRD
GVGFDGVVLSKLDGDARGGAALSIAHVTGKQIMFASNGEKLDDFDAFHPDRMASRILGMG
DIMSLIEKAEQTFSQEEAAKMASKLASKKGQEFTLDDFLAQMEQVRKMGSISKLLGMLPG
MGQMKDQIANIDEREVDRVGAIIKSMTPAERQDPTIINGSRRARIAKGSGVEVSAVKGLV
ERFFEARKMMSRMAQGGGMPGMPGIPGMGGGPGRQKKQIKQAKGKRKSGNPMKRKAEEQA
AQAKREQAQAGGAFGLPAAGQGPGDFELPDEFKKFMG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgataccctctccgaccgccttgcagcgaccttcaagaacctccgcggcaagggg
cgcctgtccgaggcggacatcgacgccaccgcgcgcgagatccgtatcgccctgctcgaa
gccgatgtcgcgctgccggtcgtccgggcgttcatcaagaacgtcaaggagcgggccgtc
ggggccgaggtctccaaggcgctgaacccctcgcagcaggtcatcaagatcgtcaacgag
gagctcatcggcatcctcggcggcgagacccgccgactgcggttcgccaagaacccgccg
accgtgatcatgctggccggtctccagggtgccggtaagaccaccctcgccggaaagctc
ggcctctggctcaagggccagggccacaccccgctgctcgtcgcctgcgacctccagcgc
cccaacgccgtcacccagctcggcgtcgtcgccgaccgcgccggcgtcggcttctacggc
ccccagcccggcaacggcgtcggcgacccggtccaggtcgccaaggactcgatcgagtac
gcccggtcgaagatgcacgacgtcgtcatcgtcgacaccgccggccgcctcggcatcgac
caggagctgatgcagcaggccgcggacatccgcgacgccgtctcgcccgacgaggtcctc
ttcgtcgtcgacgccatgatcggtcaggacgcggtcaacaccgccgaggccttccgcgac
ggcgtcggcttcgacggcgtggtgctctcgaagctcgacggcgacgcccgcggtggtgcc
gcgctgtccatcgcgcacgtcaccggcaagcagatcatgttcgcctccaacggcgagaag
ctggacgacttcgacgcgttccacccggaccgcatggcgtcccgcatcctcggcatgggc
gacatcatgtcgctcatcgagaaggccgagcagaccttcagccaggaagaggccgccaag
atggcctccaagctggcgtccaagaagggccaggagttcaccctcgacgacttcctggcc
cagatggagcaggtccgcaagatgggctccatctccaagctcctcggcatgctgcccggc
atgggccagatgaaggaccagatcgccaacatcgacgagcgcgaggtcgaccgcgtcggc
gccatcatcaagtcgatgaccccggccgagcgccaggacccgaccatcatcaacggctcg
cgccgcgcccgtatcgccaagggttccggcgtcgaggtcagcgccgtcaagggcctcgtg
gagcgcttcttcgaggcccgcaagatgatgtcgcgcatggcccagggcggcggcatgccg
ggcatgccggggatcccgggcatgggcggcggccccggccggcagaagaagcagatcaag
caggccaagggcaagcgcaagagcggcaacccgatgaagcgcaaggccgaggaacaggcc
gcccaggcgaagcgcgagcaggcgcaggccggcggcgccttcggcctgccggcggcgggc
cagggcccgggcgacttcgagctgccggacgagttcaagaagttcatgggctga
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