Streptomyces roseicoloratus: RGF97_09470
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Entry
RGF97_09470 CDS
T09671
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sroc
Streptomyces roseicoloratus
Pathway
sroc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGF97_09470 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sroc03021
]
RGF97_09470 (rho)
03019 Messenger RNA biogenesis [BR:
sroc03019
]
RGF97_09470 (rho)
Transcription machinery [BR:
sroc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RGF97_09470 (rho)
Messenger RNA biogenesis [BR:
sroc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RGF97_09470 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
ResIII
AAA_22
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
WMX45035
UniProt:
A0ABY9RSW7
LinkDB
All DBs
Position
complement(2128703..2130721)
Genome browser
AA seq
672 aa
AA seq
DB search
MSDTTDLMGVSADNSVDNAAPAAGAATGTTARRRRSGTGLEGMVLAELQQVASGLGIRGT
ARMRKSQLIEVIKEAQAGGSAAAPAKSGDAAETKPKRRAASKARTAEPAAAETAEPKAEK
AAEPVAQQQIEIPGQPAGVDAPAGERRRRRATAPAGSPDGAEAKAETAQVVKTEARAEAR
TETRSEPQADAKAEADGAEGRGRRERGERGDRRDRRDRQRDRKGDDQQGGGQGGQRKERQ
GQPQGQQGGQPAGPQDDGYDDEAGGRRGRRGRYRDRRGRRGRDDFAGEPQVSEDDVLIPV
AGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKSGLRKGDHVTGAVRQPKEGERREKFN
ALVRLDSVNGMAPESGRGRPEFNKLTPLYPQDRLRLETDPGVLTTRIIDLVSPIGKGQRG
LIVAPPKTGKTMIMQAIANAITHNNPECHLMVVLVDERPEEVTDMQRSVKGEVISSTFDR
PAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSTAL
YPPKRFFGAARNIEDGGSLTILATALVDTGSRMDEVIFEEFKGTGNMELKLDRKLADKRI
FPAVDVDASGTRKEEILLGSEELSITWKLRRVLHALDQQQAIELLLDKMKQTKSNAEFLL
QIQKTTPGANND
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgtgagtgccgacaacagcgtcgacaacgccgcg
cccgccgcaggtgctgccactggcaccaccgcacggcgccgccgctccggcaccggcctc
gagggcatggtcctggccgagctgcagcaggtcgcgtccggcctcggcatcaggggcacc
gcgcggatgcgcaagagccagctgatcgaggtcatcaaggaggcgcaggccggcggctcc
gccgccgcgcccgccaagtccggcgacgccgccgagaccaagccgaagcgccgcgccgcc
tccaaggcccgtacggccgagcccgctgccgccgagacggccgagccgaaggccgagaag
gccgccgagcccgtcgcccagcagcagatcgagatcccgggccagcccgcgggcgtcgac
gccccggcgggcgagcgccgccgccgccgcgcgaccgcccccgccggttcgccggacggc
gccgaggccaaggccgagaccgcccaggtcgtcaagaccgaggcccgcgccgaggcccgt
acggagaccaggtccgagccgcaggccgacgccaaggccgaggccgacggtgccgagggc
cgtggccgccgcgagcgcggcgagcgcggtgaccgccgcgaccgccgtgaccgccagcgc
gaccgcaagggcgacgaccagcagggcggcggccagggcggccagcgcaaggagcgccag
ggccagccgcagggccagcagggcggccagccggccggcccgcaggacgacggctacgac
gacgaggccggcggccgccggggccgtcgcggccgctaccgcgaccgccggggccgtcgc
ggccgtgacgacttcgcgggcgagccgcaggtctccgaggacgacgtcctgatccccgtc
gcgggcatcctcgacatcctcgacaactacgcgttcatccggacctccggctacctgccc
ggcccgaacgacgtgtacgtctccctcgcccaggtccgcaagagcggtctgcgcaagggc
gaccacgtcaccggtgcggtgcgccagccgaaggagggcgagcgccgcgagaagttcaac
gcgctggtgcgcctcgactcggtcaacggcatggcgccggagtccggccgcggccgcccc
gagttcaacaagctcaccccgctgtacccgcaggaccgcctccgtctggagaccgacccg
ggcgtgctgaccacgcggatcatcgacctcgtgtcgccgatcggcaagggccagcgcggt
ctgatcgtggccccgccgaagaccggcaagaccatgatcatgcaggcgatcgccaacgcg
atcacccacaacaaccccgagtgccacctgatggtcgtcctcgtcgacgagcgtccggaa
gaggtcaccgacatgcagcggtcggtcaagggcgaggtcatctcctcgaccttcgaccgc
ccggccgaggaccacaccacggtcgccgagctggccatcgagcgcgccaagcgcctcgtg
gagctgggtcacgacgtggtcgtcctgctcgactccatcacccgcctgggccgcgcgtac
aacctcgcggcgcccgcctccggccgcatcctgtccggtggtgtcgactcgaccgcgctc
tacccgccgaagcgcttcttcggtgccgcgcgcaacatcgaggacggcggctcgctgacc
atcctggccaccgcgctggtcgacaccggctcgcgcatggacgaggtgatcttcgaggag
ttcaagggcaccggcaacatggagctcaagctcgaccggaagctcgccgacaagcgcatc
ttcccggccgtcgacgtcgacgcctcgggcacgcgcaaggaggagatcctgctcggcagc
gaggagctctccatcacctggaagctgcgccgcgtgctgcacgcgctcgaccagcagcag
gcgatcgagctgctgctcgacaagatgaagcagacgaagtcgaacgccgagttcctgctg
cagatccagaagacgacgcccggcgccaacaacgactga
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