Streptomyces roseicoloratus: RGF97_10025
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Entry
RGF97_10025 CDS
T09671
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sroc
Streptomyces roseicoloratus
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sroc03021
]
RGF97_10025
Transcription machinery [BR:
sroc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RGF97_10025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
HTH_24
PF0610-like_N
NirdL-like_HTH
HTH_10
HTH_AsnC-type
HTH_3
HTH_Crp_2
DUF7343
Sigma70_ECF
MarR
IF2_N
DUF8073_C
HTH_ParB
GerE
HTH_AraC
HTH_28
DUF4423
UBA_2
Motif
Other DBs
NCBI-ProteinID:
WMX48822
UniProt:
A0ABY9S315
LinkDB
All DBs
Position
2259561..2260478
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AA seq
305 aa
AA seq
DB search
MPQQQARSQEPAGTEVEIEVATEQADQMSEQQEQHEAVPDAAGPREAPPQEVPDPHDRSG
ARALFVELRGLPEGSPEKAALRDRLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIK
SVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLSLTTATAELSQQH
GRSPTVHELAERLGISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGAEDEALEG
VEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQLRDK
LLVEE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atccctcagcagcaggcacggtcgcaggagccggccggtaccgaggtcgagatcgaggtc
gctacggagcaggcggaccagatgagcgagcagcaggagcagcacgaagcggtgcctgac
gcggccgggccgcgggaggcgccgccgcaggaggtgcccgacccgcacgaccgcagtggt
gcgcgggcgctcttcgtcgagctgcgcggccttccggagggttcgcccgagaaggcggcg
ctgcgcgaccggctggtgcggatgcacctgccgctggtggagcacctggcccggcgcttc
cgcaaccggggcgagccgctggacgacctgacccaggtggcgacgatcggtctgatcaag
tcggtggaccggttcgacccggaccgcggagtggagttctccacgtacgcgacgccgacg
gtggtgggcgagatcaagcgccacttccgggacaagggctgggcggtacgggtcccgcgc
aggctccaggagctgcggctctcgctgacgacggcgacggcggagctgtcgcagcagcac
gggcgctcgccgaccgtgcacgagctggccgagcgtctggggatctccgaggaggaggtc
ctggagggcctggagtcggcgaacgcgtactcgacgctgtcgctggacgtgccggacacg
gacgacgagtcgccggcggtggcggacacgctgggcgcggaggacgaggcgctggagggc
gtcgagtaccgggagtcgctgaagccgctcctggaggacctgccgccgcgcgagaagcgg
atcctgctgctgcgcttcttcgggaacatgacccagtcgcagatcgcccaggaggtcggc
atctcgcagatgcacgtctcccggctgctcgcgcgcacgctggcccagctgcgggacaag
ctgctcgtggaggagtga
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