Streptomyces roseicoloratus: RGF97_12465
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Entry
RGF97_12465 CDS
T09671
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sroc
Streptomyces roseicoloratus
Pathway
sroc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RGF97_12465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sroc03021
]
RGF97_12465
03400 DNA repair and recombination proteins [BR:
sroc03400
]
RGF97_12465
Enzymes [BR:
sroc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RGF97_12465
Transcription machinery [BR:
sroc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RGF97_12465
DNA repair and recombination proteins [BR:
sroc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RGF97_12465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AbiEi_4
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WMX45499
LinkDB
All DBs
Position
complement(2792721..2793743)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGVVTAADIAPPAGVEVHN
PDLVLATLNAKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgctcagcgtccttcgctgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtcatcgagccgctggagccgggcttcggctacaccctcggcaactccctccgccgc
accctcctctcgtcgatccccggcgctgctgtcaccagcatccgcatcgacggcgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagcccgtcgtgatgtacctgcgcaagcag
ggccccggtgtggtcaccgccgccgacatcgcgccgccggccggtgtcgaggtgcacaac
cccgacctggtcctggccacgctcaacgccaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtccagaacaagcaggtgggccaggagatcggc
cgtatcccggtcgactccatctacagccccgtgctgaaggtcacctacaaggtcgaggcg
acccgagtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccgcgtgacgccatggcgtcggccggcaagaccctggtcgagctgttcggc
ctggcccgcgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctggccgccgacctggcgctgccgatcgaggagctcgagctcaccgttcggtcc
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtcgcccgctccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgcggacgcgggcttcgtcgagaccgagcagtac
tga
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