Streptomyces roseicoloratus: RGF97_12775
Help
Entry
RGF97_12775 CDS
T09671
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sroc
Streptomyces roseicoloratus
Pathway
sroc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RGF97_12775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sroc03021
]
RGF97_12775
03400 DNA repair and recombination proteins [BR:
sroc03400
]
RGF97_12775
Enzymes [BR:
sroc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RGF97_12775
Transcription machinery [BR:
sroc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RGF97_12775
DNA repair and recombination proteins [BR:
sroc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RGF97_12775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Orbi_VP1
TarH
Motif
Other DBs
NCBI-ProteinID:
WMX45556
UniProt:
A0ABY9RVN2
LinkDB
All DBs
Position
complement(2843843..2847766)
Genome browser
AA seq
1307 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDDERRTRDLPSLEAHVSVERQQIENRRDSDLEARAKKLESD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLEEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTANSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGELRDVKGE
GRAFGSTAEAIMAFDAGELSLQAQIDIRFPIGTVPPRGWVPPVAEEGTESDSGSAAGSWQ
QGDSFRLKTTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLK
ASGFYWATRSGVTVAISDVVVPEAKKQIVAGYEAQDEKVQKQYERGLITKEERTQELIAI
WTKATNEVAEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIK
ASFREGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGL
KLRIAAKDEAGVLRKAEDVETSVYARCLAEDVVVDGKVLAPAGVDLGDVLIEQLVTAGVE
EVKTRSVLTCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTG
GVAGDDITQGLPRVVELFEARQPKGVAPISEAAGRVRIEETEKTKKIVVTPDDGSDETAF
PISKRARLLVGEGDHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSI
HDKHIEIIIRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVQEGGHPASGRPQLMG
ITKASLATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRN
IRVEPTEEAKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcggtgtggcgtc
gaggtcacccgcgccaaggtgcgccgtgagcggatgggccacatcgagctggccgctccc
gtcacccacatctggtacttcaagggcgttccgtcgcgtctgggctacctgctcgacctc
gccccgaaggacctggagaaggtcatctacttcgcggcgtacatgatcacgtacgtcgac
gacgagcgccgtacgcgcgacctgccctcgctggaggcgcacgtctccgtcgagcgtcag
cagatcgagaaccgccgcgactccgacctggaggcccgcgccaagaagctcgagtccgac
ctggccgagctcgaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggc
gccgagcgcgagatgaagcagctccgcgaccgcgcgcagcgcgagatcgaccgcctcgac
gaggtgtggaaccgcttcaagaacctcaaggtccaggacctggagggcgacgagctcctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctcgatgggtgccgcggcg
ctgcagaagcgcctcgagtccttcgacctggaggaggaggcggagaagctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcg
gcgttcctgcagaccgcgaacagccccaagggcatggttctcgactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctcgacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgtctgaagcgtctgctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcggatgctccaggaggcggtcgacgcc
ctcttcgacaacggccgtcgcggtcgcccggtcacgggccccggcaaccgtccgctgaag
tccctcagcgacatgctgaagggcaagcagggtcgattccgtcagaacctgctcggcaag
cgtgtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgccgaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggccaagcggatggtcgagcgcggccgc
acggtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtcctgctgaaccgt
gctcccacgctgcaccgcctcggcatccaggccttcgagccccagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgacggcgagctgcgtgacgtcaagggcgag
ggccgcgcgttcggctccaccgccgaggcgatcatggcgttcgacgccggcgagctgtcg
ctgcaggcgcagatcgacatccgcttcccgatcggcaccgttccgccgcgcggctgggtt
cccccggtcgcggaggagggcaccgagtccgacagcggctccgccgcggggtcgtggcag
cagggtgacagcttccgtctgaagaccacgctcggccgtgcgctcttcaacgagctgctg
cccgaggactacccgttcgtcgactactcggtcggcaagaagcagctctccgagatcgtc
aacgacctcgccgagcgctaccccaaggtcatcgtggcggcgacgctcgacaacctgaag
gcgtccggcttctactgggccacccgttccggcgtcaccgtcgccatctcggacgtcgtc
gtccccgaggcgaagaagcagatcgtcgccggctacgaggcgcaggacgagaaggtccag
aagcagtacgagcgcggtctgatcaccaaggaagagcgcacgcaggagctcatcgcgatc
tggaccaaggcgaccaacgaggtcgccgaggcgatgaacgcgaacttccccaagaccaac
cccatcttcatgatggtcgactcgggtgcccgaggaaacatgatgcagatgcggcagatc
gccggtatgcgcggtctggtgtcgaacgcgaagaacgagaccatcccgcgtccgatcaag
gcctcgttccgcgagggcctctccgtgctcgagtacttcatctcgacccacggtgcccgt
aagggtctcgccgacaccgccctgcgtaccgccgactcgggttacctgacccgtcgtctg
gtggacgtctcgcaggacgtgatcatccgcgaggaggactgtggcaccgaccgcggtctg
aagctgcggatcgcggccaaggacgaggccggcgtgctgcgcaaggccgaggacgtcgag
accagcgtgtacgcgcgctgcctcgcggaggacgtcgtcgtcgacggcaaggtgctggcc
ccggccggcgtcgacctgggtgacgtgctcatcgagcagctggtcaccgcgggcgtcgag
gaggtcaagacgcgttcggtcctgacctgtgagtccgccgtcggcacctgcgccatgtgc
tacggccgctcgctggccaccggcaagctggtcgacatcggtgaggcggtcggcatcatc
gccgcccagtccatcggtgagcccggtacccagctgacgatgcgtaccttccacaccggt
ggtgtggccggtgacgacatcacccagggtctgccgcgtgtcgtcgagctcttcgaggcc
cgtcagcccaagggtgtcgccccgatctccgaggcggccggtcgcgtccgcatcgaggag
accgagaagaccaagaagatcgtcgtcaccccggacgacggcagcgacgagacggcgttc
ccgatctcgaagcgtgcccgtctgctggtgggcgagggcgaccacgtcgaggtgggccag
aagctcaccgtgggtgccaccaacccgcacgacgtgctgcgcatcctcggccagcgcgcg
gtccaggtccacctggtcggcgaggtccagaaggtctacaactcgcagggcgtgtcgatc
cacgacaagcacatcgagatcatcatccggcagatgctgcgccgcgtgacgatcatcgag
tccggtgacgcggagctgctgccgggcgagctcgtggagcgctcgaagttcgagaccgag
aaccgtcgtgtggtccaggaaggcggccacccggcctccggccgtccgcagctgatgggt
atcaccaaggcctcgctggcgacggagtcctggctgtcggccgcctccttccaggagacg
acccgagtgctgacggacgcggcgatcaacgccaagtccgacagcctcatcggcctcaag
gagaacgtcatcatcggtaagctcatcccggccggtacgggtctgtcccgctaccgcaac
atccgggtcgagccgaccgaggaggccaaggccgcgatgtactcggccgtcggctacgac
gacatcgactactcgccgttcggcaccggctccggccaggccgttccgctggaggactac
gactacggtccgtacaaccagtaa
DBGET
integrated database retrieval system
