Streptomyces roseicoloratus: RGF97_13580
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Entry
RGF97_13580 CDS
T09671
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sroc
Streptomyces roseicoloratus
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sroc03016
]
RGF97_13580 (thpR)
Enzymes [BR:
sroc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RGF97_13580 (thpR)
Transfer RNA biogenesis [BR:
sroc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RGF97_13580 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
WMX45677
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All DBs
Position
3021318..3021902
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AA seq
194 aa
AA seq
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MRLFAAVLPPSAQLDELGREVDRLAHLPGADRLRWTARPGWHFTLAFMGEVDETLLPDLH
ARLGRAAHRTAPFPLRLHGGGHFGRGVLWTGAAGGLDEMRLLAERADAAARRAGVAMDEH
RRYQAHLTVARSRTDAVDLRPFVTALTPFEGTRWQVADLTLIRSHLPGGGPPGRQPRYET
IATWPLGGGAGAGG
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttttcgctgccgtcctgccgccgtccgcgcagctcgacgagctggggcgcgag
gtcgaccggctcgcgcacctgccgggagccgaccggctccgctggaccgcacggcccggc
tggcacttcacgctcgccttcatgggcgaggtcgacgagaccctgctgcccgacctgcac
gcccggctcggccgcgccgcccaccgcaccgcgcccttcccgctgcgcctgcacggcggc
ggacacttcggccgcggggtgctgtggaccggcgcggcgggcggcctggacgagatgcgg
ctgctcgccgagcgcgcggacgccgccgcccgccgggccggcgtcgcgatggacgagcac
cgccgctaccaggcgcacctcaccgtggcccgctcccgcaccgacgccgtggacctccgc
ccgttcgtcaccgccctcacccccttcgagggcacccgctggcaggtcgcggacctcacc
ctgatccgcagccacctccccggcggcggcccgccgggcaggcagccccgctacgagacg
atcgccacgtggccgctgggcggaggggccggtgcggggggttaa
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