Streptomyces roseicoloratus: RGF97_15640
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Entry
RGF97_15640 CDS
T09671
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sroc
Streptomyces roseicoloratus
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sroc03021
]
RGF97_15640
Transcription machinery [BR:
sroc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RGF97_15640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_24
DUF7343
MarR
Motif
Other DBs
NCBI-ProteinID:
WMX45994
LinkDB
All DBs
Position
3461880..3462938
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AA seq
352 aa
AA seq
DB search
MSAEQGSSKVLTLTPMQTPTLTPVPAQTPVPAQTTAPTAADATAADLGASGVAVADRAVA
DLAVPDTTARTDATATDGTEGAETHPAPPAVAPEALDTRTLSRSLFLRLRALDDEGVAAD
SPERTYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFP
TFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVPELAAVLG
VSEEDVVDGLAVGNAYTASSLDSPSPEDDGGEGSLADRLGYEDTALEGVEYRESLKPLLA
KLPPRERQIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLIAD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctcgaaggtgctcacgctcacgcccatgcagacgcccacg
ctgacgcccgtgcccgcgcagacgcccgttccggcgcagacgacggcaccgaccgccgcg
gacgccacggcggcggacctcggcgcctcgggcgtcgccgtcgcggaccgcgccgtggcg
gacctcgccgtccccgacaccaccgcgcgcacggacgccaccgccacggacggcaccgag
ggggcggagacgcaccccgcaccgccggccgtcgcgcccgaggcactcgacacccggacc
ctgtcccgctccctcttcctgcggctgcgcgccctggacgacgagggcgtggccgcggac
agccccgagcggacgtacgtccgcgacaccctcatcgagctcaacctcccgctcgtgcgc
tacgcggcggcccgcttccgctcccgcaacgagccgatggaggacatcgtccaggtcggc
accatcggcctgatcaaggcgatcgaccgcttcgactgcgaacggggcgtggagttcccg
acgttcgcgatgccgaccgtcgtcggcgagatcaagcgcttcttccgcgacacctcgtgg
tcggtgcgcgtcccgcgccgcctccaggaactgcggctcgccctcaccaaggccagcgac
gagctctcgcagaagctcgaccgctcgccgaccgtgcccgaactcgccgcggtgctcggg
gtgtcggaggaggacgtggtcgacggcctcgccgtcgggaacgcgtacaccgcctcctcg
ctcgactccccgtcccccgaggacgacggcggcgagggctccctggccgaccgcctcggc
tacgaggacacggccctggaaggcgtcgagtaccgcgagtccctgaagccgctgctcgcc
aaactcccgccccgggaacggcagatcatcatgctccgcttcttcgcgaacatgacgcag
tcgcagatcggcgaggaggtcggcatctcgcagatgcacgtctcccgcctcctgacgcgc
acgctggcacagctgcgggagggcctgatcgcggactga
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