Streptomyces roseicoloratus: RGF97_18075
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Entry
RGF97_18075 CDS
T09671
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sroc
Streptomyces roseicoloratus
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sroc03032
]
RGF97_18075 (topA)
03400 DNA repair and recombination proteins [BR:
sroc03400
]
RGF97_18075 (topA)
Enzymes [BR:
sroc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RGF97_18075 (topA)
DNA replication proteins [BR:
sroc03032
]
Prokaryotic type
DNA Topoisomerases
RGF97_18075 (topA)
DNA repair and recombination proteins [BR:
sroc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RGF97_18075 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WMX46370
LinkDB
All DBs
Position
3982159..3985002
Genome browser
AA seq
947 aa
AA seq
DB search
MSPTSETAQGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPSGAAEVPEKYTGE
VRRLGVDVDHDFAPIYVVNADKKAQVRKLKELLAESDELFLATDEDREGEAIAWHLQEVL
KPKVPVHRMVFHEITKDAIQQAVRNPRELNKRMVDAQETRRILDRLYGYEVSPVLWKKVM
RGLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFSTGRAGDPSDPSSLVARLATVD
GKRVAQGRDFGADGQLKTANVLHLDEGKARALAASLADTRFSVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTVLSETAVSAARAQVTQLYGA
DYLPEKPRVYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQMK
DATGNSVTVRIGGTAADGRDAEFTASGKTITFHGFMKAYVEGADDPNAELDDRERRLPQV
AEGDALAAEEITADGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTARMEDDLDRIARGEAQAVPWLKRFYFGEGG
ATGPEGSGAADAGNGDGDHLGGLKELVTDLGAIDAREISSFPVGNGIVLRVGRYGPYVER
GEKDQEGHQRADVPGDMAPDELTVEYAEELLAKPSGDFELGTDPVSGNMIVAKDGRYGPY
VTEILPEDTPKTGKNAVKPRTASLFKTMSVDTVTLEEALKLMSLPRVVGTDAEGVEITAQ
NGRYGPYLKKGTDSRSLTDEEQLFTITLEEALAIYAQPKQRGRAAAKPPLKELGTDPVSE
KPVVVKDGRFGPYVTDGETNATLRTGDSVETITPERGYELLAEKRAKGPAKKAAKKAPAK
KTATKKTAAKKTTTAKTAAKKTTAAKKTTTAKKTAAAAKKTAAAKPE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcacagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctacctcggccccggctacgtcgtcgaggcgagcgtc
gggcacatccgcgacctcccgagcggcgccgccgaggtgcccgagaagtacaccggcgag
gtgcgccgtctcggcgtcgacgtcgatcacgacttcgcgcccatctacgtcgtcaacgcc
gacaagaaggcgcaggtcaggaagctcaaggagctgctggccgagtccgacgagctcttc
ctcgccaccgatgaggaccgcgagggcgaggccatcgcgtggcacctccaggaggtcctc
aagcccaaggtgcccgtgcaccggatggtcttccacgagatcaccaaggacgccatccag
caggccgtgcgcaacccgcgcgagctcaacaagcggatggtcgacgcccaggagacccgc
cgcatcctcgaccgcctctacggctacgaggtgtcgccggtcctctggaagaaggtcatg
cgcggcctgtccgccggccgcgtccagtccgtcgccacccggctcgtcgtcgagcgcgag
cgcgagcgcatcgccttccgctccgccgagtactgggacctcaccggcaccttctccacc
ggccgcgccggcgacccgtccgacccgtcgtccctggtcgcacggctcgcgacggtcgac
ggcaagcgggtcgcacagggccgtgacttcggcgccgacgggcagctgaagaccgcgaac
gtgctccacctcgacgaggggaaggcccgcgcgctcgccgcctccctcgccgacacccgc
ttctccgtccgctcggtcgagtcgaagccgtaccgccgctccccgtacgcgccgttccgc
accaccaccctccagcaggaggccagccgcaagctcggcttcggcgcgaaggcgaccatg
caggtggcgcagaagctgtacgagaacggcttcatcacctacatgcgtacggactccacg
gtgctgtccgagaccgccgtgtcggcggcccgcgcccaggtcacgcagctgtacggcgcc
gactacctgccggagaagccgcgcgtctacgccggcaaggtcaagaacgcccaggaggcg
cacgaggcgatcaggccttcgggtgatcgtttccgcaccccggcggagaccggtctgacc
ggtgaccagttccggctctacgagctgatctggaagcggaccgtcgcctcccagatgaag
gacgcgaccggcaactccgtcaccgtcaggatcggcggcaccgccgccgacggccgcgac
gccgagttcacggcctccggcaagaccatcaccttccacggcttcatgaaggcctacgtc
gagggcgccgacgacccgaacgcggagctcgacgaccgcgagcggcgcctgccgcaggtc
gccgagggcgacgcgctcgccgccgaggagatcaccgccgacggccacgccaccaagccg
ccggcccgctacaccgaggccagcctggtcaaggagctcgaagagcgcgagatcggccgc
ccgtcgacgtacgcctcgatcatcggcaccatcctcgaccgcggctacgtcttcaagaag
ggcacggccctcgtgccgtccttcctgtccttcgccgtggtcaacctcctggagaagcac
ttcgggcggctcgtcgactacgacttcaccgccaggatggaggacgacctcgaccgcatc
gcgcgcggcgaggcccaggcggtgccgtggctgaagcgcttctacttcggcgagggcggc
gccaccggccccgagggctccggtgccgcggacgccggcaacggcgacggcgaccacctc
ggcggtctgaaggagctcgtcaccgacctcggcgcgatcgacgcgcgagagatctcttcc
ttcccggtcggcaacggcatcgtgctccgcgtcggccgctacggcccgtacgtcgagcgc
ggcgagaaggaccaggaaggccaccagcgcgccgacgtgcccggtgacatggcgccggac
gagctgaccgtcgagtacgccgaggagctgctcgccaagccgagcggcgacttcgagctg
ggtaccgacccggtcagcggcaacatgatcgtcgccaaggacggccgctacggcccgtac
gtgacggagatcctgcccgaggacaccccgaagaccggcaagaacgcggtcaagccgcgc
accgcctcgctcttcaagacgatgtcggtcgacacggtgaccctcgaggaggccctcaag
ctgatgtcgctgccgcgcgtcgtcggcaccgacgccgagggcgtcgagatcaccgcgcag
aacggccgctacggcccgtacctcaagaagggcacggactcgcggtccctcaccgacgag
gagcagctgttcacgatcacgctggaggaggcgctggcgatctacgcccagcccaagcag
cgtggccgggccgccgccaagcctccgctgaaggagctcggcaccgaccccgtcagcgag
aagcccgtggtcgtcaaggacggccgcttcggcccgtacgtgaccgacggcgagaccaac
gccaccctgcgcaccggcgacagcgtggagacgatcacgcccgagcgcggctacgagctg
ctcgccgagaagcgggccaagggccccgcgaagaaggcggccaagaaggcgcccgcgaag
aagaccgccaccaagaagacggcggccaagaagacgacgacggccaagaccgcggcgaag
aagaccaccgccgcgaagaagaccacgacggcgaagaagaccgccgccgccgccaagaag
acggcggccgcgaagccggagtga
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