Streptomyces roseicoloratus: RGF97_20270
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Entry
RGF97_20270 CDS
T09671
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sroc
Streptomyces roseicoloratus
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sroc03021
]
RGF97_20270
Transcription machinery [BR:
sroc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RGF97_20270
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_ECF
MarR_2
HTH_3
HTH_Crp_2
GerE
HTH_24
HTH_37
HTH_31
DUF7343
IF2_N
MarR
Motif
Other DBs
NCBI-ProteinID:
WMX46698
LinkDB
All DBs
Position
complement(4481775..4482809)
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AA seq
344 aa
AA seq
DB search
MSPRLDVPAPAVPDHAALDHPVRDHAALDHTTPDHTAPAHMAPDHTVQAHTAADHTAADH
TAADHTVPDHTVADHTVAELPRIPPVDEIAPHDARALSKTLFARLGDLEEGTHEYAYVRN
TLIELNLALVKFAASRFRTRSEPMEDIVQVGTIGLIKAIDRFELARGVEFPTFAMPTIIG
EIKRFFRDTSWSVHVPRRLQELRLDLAKAGDELAQRLDRAPTVEELARELGIRTDEVVEG
MAAANAYTASSLDAPPDETDADGATLADRLGYEDHGIEGIEYVESLKPMIASLPARERRI
LSLRFTAGLTQSEIGEELGISQMHVSRLLSRTLARLRRGLTAEE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtccccccggctcgacgtaccggcccctgcggtcccggaccacgcggccctggaccac
ccggtccgggaccacgcggccttggaccacacgaccccggaccacacagcccctgcccac
atggccccggaccacacagtccaggcccacacagcggcagaccacacagcagcagaccac
acagcggcggaccacacggtcccagaccacacggtcgcggaccacacggtcgcggaactc
ccgcggatcccgcccgtcgacgagatcgcgccgcacgacgcgcgcgccctgtcgaagacc
ctcttcgcccgcctcggcgacctggaggagggcacccacgagtacgcgtacgtccgcaac
accctgatcgaactcaacctggccctggtcaagttcgccgcctcgcggttccgcacccgc
agcgaaccgatggaggacatcgtccaggtcggcacgatcggcctcatcaaggcgatcgac
cgcttcgaactggcccgcggcgtcgagttccccaccttcgcgatgccgacgatcatcggc
gagatcaagcgcttcttccgcgacacctcgtggtcggtgcacgtcccgcgcaggctccag
gagctccgcctcgacctggccaaggccggcgacgaactcgcccagcgcctcgaccgggcg
cccaccgtcgaggaactcgcccgcgagctgggcatccgtacggacgaggtcgtcgagggc
atggcggccgcgaacgcgtacaccgcgagctcgctcgacgccccgcccgacgagaccgac
gccgacggcgcgaccctcgccgaccggctcggctacgaggaccacggcatcgagggcatc
gagtacgtcgagtcgctcaagccgatgatcgcctcgctcccggcccgcgaacgccgcatc
ctgtcgctgcgcttcacggccggcctcacgcagtcggagatcggcgaggaactgggcatc
tcccagatgcacgtctcccgcctcctctcccgcacgctggcccgcctgcgcaggggtctg
acggccgaggagtga
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