Streptomyces roseicoloratus: RGF97_21265
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Entry
RGF97_21265 CDS
T09671
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sroc
Streptomyces roseicoloratus
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sroc03400
]
RGF97_21265
DNA repair and recombination proteins [BR:
sroc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
RGF97_21265
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
HTH_33
Motif
Other DBs
NCBI-ProteinID:
WMX48979
LinkDB
All DBs
Position
complement(4708845..4709294)
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AA seq
149 aa
AA seq
DB search
MPPEGSWASSAARRRNMQAIRSRDTKPEQLIRRLLHAQGLRYRVAAKPLPGLRRTADIVF
RPAKVAVFIDGCYWHGCPEHYVPPKTNPGYWSGKVAGNIARDRDTDQRLKAAGWTVLRFW
EHEPSTECAARIAAEVEKRRARTRGTGTT
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atccccccagaagggtcgtgggcctcttccgccgcccggcgccggaacatgcaggccatc
agaagccgcgacaccaaacccgaacagctaatccggcggcttctgcatgcgcaagggctg
aggtatcgggtcgccgccaaacccctacccggcctccggaggacggcagacatcgtcttc
cggcccgccaaggtagctgtcttcatcgacggctgctattggcacggctgcccggagcac
tacgttccgcccaagaccaaccccggctattggtccggcaaagtcgccgggaacatcgct
cgtgacagggatactgaccagcgactgaaagcggccggctggaccgtgctccggttctgg
gagcatgagccctcaacagagtgcgccgcccggattgcggcggaggttgagaagcgtcgc
gcccgcacgcggggcacgggcacgacgtga
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