Streptomyces roseicoloratus: RGF97_21800
Help
Entry
RGF97_21800 CDS
T09671
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sroc
Streptomyces roseicoloratus
Pathway
sroc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RGF97_21800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sroc03400
]
RGF97_21800
Enzymes [BR:
sroc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RGF97_21800
DNA repair and recombination proteins [BR:
sroc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RGF97_21800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
HHH_5
Helicase_RecD
PIF1
PhoH
TraI_hel_assoc_N
NPHP3_N
AAA_16
nSTAND3
UvrD-helicase
HTH_IclR
DEAD
AAA
DUF87
TrwB_AAD_bind
UvrD_C
SLFN-g3_helicase
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
WMX46923
LinkDB
All DBs
Position
4822999..4825224
Genome browser
AA seq
741 aa
AA seq
DB search
MSSEVRSLAVVEGVLERITYANEENGYTVARVDIGRGSGDLLTVVGSLLGAQPGESLRME
GRWGSHPQYGRQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVFADRITTHFGLDTLTI
LEESPQRLIEVPGLGPKRTGNIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDAS
ISVVKNQPYRLAADVWGIGFLTADRLAQAVGIPHDSPDRVKAGLQYALSQSTDQGHCFLP
EERLISDAVKLLQVDTGLVIECLGELAEDPEGVVREKVPGPEGLPVNGIYLVPFHRAELS
LAGQLRRLLAADEDRLAAFRDVAWDKALAWLADRTGASLAPEQEQAVRLALTRKVAVLTG
GPGCGKSFTVRSIVELARAKRAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDA
AYDRDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLADL
LAPGGPVPAVRLTRIFRQAQQSGVVTNAHRINEGLPPVTHGLPDFFLFAEEETEDAARVA
VEVAARRIPARFGLDPRRDIQVLAPMHRGPAGAGTLNGLLQQVITPARPDLPEKRFGGRV
FRVGDKVTQIRNNYEKGANGVFNGTVGVVTSLDPVEQRLVVRTDEDEEVPYAFDELDELA
HAYAVTIHRSQGSEYPAVVIPVTTSAWMMLQRNLLYTAVTRARKLVVLVGSRKAIAQAVR
TVSAGRRFTALAYRLTGDSVV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaagtccgcagtctcgcagtggtcgaaggggtcctggagcggatcacctac
gccaacgaggagaacgggtacacggtcgcccgcgtcgacatcggacgcggttccggtgat
ctcctgacggtcgtcgggtcgctgctcggcgcccagccgggggagtccctgcgcatggag
ggccgttggggctcgcacccgcagtacgggcggcagttcaccgtcgagaactacacgacc
gtcctgcccgccaccatccagggcatccgccgctatctcggctcgggcctgatcaagggc
atcgggcccgtcttcgccgaccgcatcacgacccacttcggcctggacaccctcacgatc
ctggaggagtcgccgcagcgcctgatcgaggtcccgggcctcggccccaagcgcaccggg
aacatcgccgcggcctgggaggagcagaaggcgatcaaggaggtgatggtcttcctccag
ggcgtcggcgtctccacgtccatcgccgtgcggatctacaagaagtacggggacgcctcg
atctccgtggtgaagaaccagccctaccggctggccgccgacgtctggggcatcggcttc
ctcaccgccgaccggctcgcccaggccgtcggcataccccacgacagccccgaccgggtc
aaggcggggctgcagtacgcgctgtcgcagtccaccgaccagggccactgcttcctgccc
gaggagcggctcatctccgacgccgtgaagctgctccaggtcgacaccgggctcgtcatc
gagtgcctcggcgagctggccgaggatccggagggcgtcgtgcgggagaaggtgccgggc
cccgaggggctgcccgtcaacgggatctatctcgtcccgttccaccgggccgagctgtcc
ctcgccgggcagctccgccggctcctcgccgcggacgaggaccggctcgcggcctttcgg
gacgtcgcctgggacaaggcccttgcctggctcgccgaccgcaccggcgcctcgctcgcg
ccggagcaggagcaggccgtgcgcctcgccctgacccgtaaggtcgcggtgctcacgggc
ggcccgggctgcggcaagtcgttcacggtccgctcgattgtggagctggcgcgggccaag
cgggccaaggtggtgctcgccgcgcccaccggccgggccgccaagcggctcgcggagctg
accggcgccgaggcgtcgacggtgcaccggctcctggagctgaagccgggcggcgacgcc
gcgtacgaccgggaccggccgctcgacgccgacctggtcgtcgtcgacgaggcctccatg
ctggacctgctgctcgcgaacaagctggtcaaggccgtggcaccgggtgcccacctgctg
ctcgtgggcgacgtggaccagctgccgtcggtcggagcgggcgaggtcctcgcggacctc
ctcgcccccggcggcccggtgccggccgtccggctcacccggatcttccgtcaggcccag
cagtccggggtggtcaccaacgcgcaccggatcaacgagggcctgccgcccgtgacgcat
ggtctgcccgacttcttcctcttcgccgaggaggagaccgaggacgccgcccgggtcgcc
gtggaggtcgccgcccggcggattccggccaggttcgggctcgacccgcgccgcgacatc
caggtcctcgcgcccatgcaccgcggtccggccggagccggcacgctcaacgggctgctc
cagcaggtgatcaccccggcccggccggacctcccggagaagcgcttcggcggccgggtg
ttccgggtcggcgacaaggtcacccagatccgcaacaactacgagaagggcgccaacggc
gtcttcaacggcaccgtgggcgtcgtcacctcgctcgacccggtcgagcagcggctggtc
gtgcgcaccgacgaggacgaggaggtgccgtacgcgttcgacgagctggacgagctggcg
catgcctacgctgtgaccatccaccgttcccagggcagcgagtatccggcggtggtgatc
ccggtcaccacgagcgcctggatgatgctccagcggaacctgctgtacacggccgtcacc
cgggccaggaagctcgtcgtcctggtggggtcgcgcaaggcgatcgcccaggcggtgcgc
acggtctcggcggggcgccgcttcaccgcactcgcatatcggctcacaggggacagtgtg
gtgtga
DBGET
integrated database retrieval system
