Streptomyces roseicoloratus: RGF97_23020
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Entry
RGF97_23020 CDS
T09671
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sroc
Streptomyces roseicoloratus
Pathway
sroc00521
Streptomycin biosynthesis
sroc00523
Polyketide sugar unit biosynthesis
sroc00525
Acarbose and validamycin biosynthesis
sroc00541
Biosynthesis of various nucleotide sugars
sroc01055
Biosynthesis of vancomycin group antibiotics
sroc01100
Metabolic pathways
sroc01110
Biosynthesis of secondary metabolites
sroc01250
Biosynthesis of nucleotide sugars
Module
sroc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RGF97_23020 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RGF97_23020 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RGF97_23020 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RGF97_23020 (rfbB)
00525 Acarbose and validamycin biosynthesis
RGF97_23020 (rfbB)
Enzymes [BR:
sroc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RGF97_23020 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
NmrA
adh_short
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
WMX47118
LinkDB
All DBs
Position
complement(5099436..5100422)
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AA seq
328 aa
AA seq
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MRILVTGGAGFIGSQFVRALLSGELPTSEGAQVTVLDNLTYSGNEANLAPVADKPGYTFV
QGDIRDYATVDDVMRGQDAVVHFAAESHVDRSILDSSPFVTTNVLGTQVLLDAAKRHGVG
RFVHVSTDEVYGSIAEGSWTEDWPLAPNSPYSASKAGSDLLALSYHRTHGMDVVVTRCSN
NYGQYHFPEKMIPLFTTNLLDGKKVPLYGEGLNIRDWLHVSDHCRGIEMVLRGGRAGEVY
HIGGGTEVTNKELTGLLLDACGAGWDMVEHVEDRKGHDLRYSLSIAKIQEELGYQPLVTF
EQGLADTVQWYRDNRAWWEPLKAKAALA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaggattctggtcaccggcggcgccgggttcatcggttcacagttcgtgcgggcactg
ctctccggagagctgcccaccagcgagggcgcccaggtcaccgtcctggacaacctcacc
tattcgggtaacgaggccaatctcgcccccgtggcggacaagcccggatacaccttcgtc
cagggcgacatccgcgactacgccaccgtcgacgacgtgatgcgcggccaggacgcggtg
gtgcacttcgccgccgagtcccacgtggaccgttcgatcctggactcctcgccgttcgtc
accacgaacgtgctgggcacccaggtgctcctcgacgcggccaagcggcacggcgtcggc
cggttcgtgcacgtctccacggacgaggtgtacggctcgatcgccgagggttcctggacc
gaggactggccgctcgcgccgaactccccgtactcggcctccaaggccggctcggacctg
ctggcgctgtcgtaccaccgcacgcacggcatggacgtcgtggtgacccgctgctccaac
aactacgggcagtaccacttccccgagaagatgatcccgctgttcaccacgaacctgctg
gacgggaagaaggtcccgctgtacggcgagggcctgaacatccgcgactggctgcacgtc
tcggaccactgccgtggcatcgagatggtgctccgcggcggccgcgccggtgaggtctac
cacatcggcggcggcaccgaggtcaccaacaaggagctcaccggtctgctgctggacgcc
tgcggcgccggctgggacatggtcgagcacgtcgaggaccgcaagggccacgacctgcgc
tactccctgtcgatcgccaagatccaggaggagctcggctaccagccgctcgtcaccttc
gagcagggcctcgccgacaccgtccagtggtaccgcgacaaccgcgcctggtgggagccg
ctgaaggccaaggcggcgctggcctga
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