Streptomyces roseicoloratus: RGF97_25420
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Entry
RGF97_25420 CDS
T09671
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sroc
Streptomyces roseicoloratus
Pathway
sroc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGF97_25420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sroc03400
]
RGF97_25420
Enzymes [BR:
sroc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
RGF97_25420
DNA repair and recombination proteins [BR:
sroc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RGF97_25420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WMX47489
LinkDB
All DBs
Position
complement(5615390..5616241)
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AA seq
283 aa
AA seq
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MRNPVGGHVPVAGGLATVGLGYARELGAETVQVFVANPRGWATPAGNPAQDELFRAGCEA
GGLSAWVHAPYLINFGSHTEATVEKSVDSLRHSLRRARRIGARGVVVHTGSATGGRPRAE
ALAQVRERMLPLLDELTHEDDPDLLIESTAGQGFSLCSTAEDFGPYFEALDRHPRLGICL
DTCHIFAAGHDLTGPDGAVRTLDELVAVVGEGRLKLIHANDSKDVVGAHKDRHANIGAGH
IGQEAFRNLLGHPATDGVPLIIETPGGPQGHKADVELLKKLRP
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaccccgtcggcggccacgtccccgtggccggcggtctcgccaccgtcgggctc
ggctacgcccgggagctcggcgcggagacggtgcaggtcttcgtcgccaacccgcgcggc
tgggccaccccggccggaaacccggcccaggacgaactgttccgggccggctgcgaggcc
gggggcctgtcggcctgggtccacgccccgtatctgatcaacttcggctcgcacaccgag
gccaccgtggagaagtcggtggactcgctgcggcactcgctgcggcgcgcgcggcggatc
ggcgccaggggcgtggtcgtgcacaccggctcggcgaccgggggccggccgcgcgccgag
gccctggcgcaggtgcgcgagcgtatgctgccgctgctcgacgagctgacgcacgaggac
gacccggacctgctcatcgagtcgacggccggtcagggcttctcgctctgctcgacggcg
gaggacttcggtccgtacttcgaggcgctcgaccgccatcccaggctgggcatctgcctc
gacacctgccacatcttcgccgcgggccacgacctgaccggccccgacggcgcggtccgc
accctcgacgagctggtggcggtggtcggcgagggccggctgaagctgatccacgccaac
gactcgaaggacgtcgtgggtgcgcacaaggaccggcacgccaacatcggcgcaggtcac
atcggccaggaggccttccggaatctgctgggccaccccgccacggacggcgtaccgttg
atcatcgagacgcccggcggaccgcaggggcacaaggcggacgtggagctgctgaagaag
ctgcggccctga
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