Streptomyces roseicoloratus: RGF97_26865
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Entry
RGF97_26865 CDS
T09671
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sroc
Streptomyces roseicoloratus
Pathway
sroc03030
DNA replication
sroc03430
Mismatch repair
sroc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGF97_26865
03430 Mismatch repair
RGF97_26865
03440 Homologous recombination
RGF97_26865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sroc03032
]
RGF97_26865
03400 DNA repair and recombination proteins [BR:
sroc03400
]
RGF97_26865
Enzymes [BR:
sroc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGF97_26865
DNA replication proteins [BR:
sroc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RGF97_26865
DNA repair and recombination proteins [BR:
sroc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RGF97_26865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WMX47704
UniProt:
A0ABY9S0Y9
LinkDB
All DBs
Position
complement(5928055..5929029)
Genome browser
AA seq
324 aa
AA seq
DB search
MTMLDDRTTAATWPAAYPQGYAVVDVETTGLARDDRIVSAAVYRLDAQGNVEDHWYTLVN
PERDPGPVWIHGLTSDVLEGAPLFPEIAEEFSARLEGRVLVAHNAMFDWQMIAREYARAE
GAAPVRQRLCTIALSKELSLPLPNHKLESLAAHFGVVQQRAHNALDDARVLAEAFRPSLH
AAAERNVRLPLLECRPLTEWAPAPERPRIGYQASYRGNTWRPSRKRPPCPYPNPGRYESD
KPLKQGMRVAFSGDTSIDRELLEDRATEAGLHVASSVSRLTSLLVTNDPDSATGKTLKAK
SYGTPVVDEAAFTQLLRDVAPADE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
ttgaccatgctcgacgaccgtacgacagcagcaacgtggccggccgcgtacccgcagggg
tacgcggtcgtcgacgtggagaccaccggcctcgcccgcgacgaccggatagtgtcggct
gccgtctaccggctggacgcccaggggaacgtggaggaccactggtacaccctggtcaac
cccgagcgcgaccccgggccggtgtggatccacggactcaccagcgacgtcctcgagggc
gcgccgctcttcccggagatcgccgaggagttctcggcgcgcctggagggccgggtgctc
gtcgcgcacaacgcgatgttcgactggcagatgatcgcccgtgagtacgcgcgggcggag
ggcgccgcgcccgtgcggcagcggctgtgcaccatcgcgctgtccaaggagctgtcgctg
ccgctgcccaaccacaagctggagtcgctcgccgcgcacttcggcgtcgtgcagcagcgg
gcgcacaacgcgctggacgacgcccgggtgctcgcggaggccttccggccgagcctgcac
gccgccgccgagcggaacgtgcggctgccgctgctcgagtgccggccgctgaccgagtgg
gcgcccgcgccggagcggccgcggatcgggtaccaggcctcctaccggggcaacacctgg
cggccgtcgcggaagcggccgccgtgcccgtacccgaaccccggacggtacgagtcggac
aaaccgctcaagcagggcatgcgggtggcgttctccggtgacacctcgatcgaccgcgaa
ctcctggaggaccgggcgaccgaggcgggactgcacgtggcgagcagtgtgtcgcggctc
accagcctgctggtcaccaacgacccggactcggccaccggcaagaccctgaaggcgaag
tcgtacggcacgccggtcgtcgacgaggcggccttcacccagctgctgcgcgacgtggcc
ccggcggacgagtga
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