Streptomyces roseicoloratus: RGF97_30040
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Entry
RGF97_30040 CDS
T09671
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
sroc
Streptomyces roseicoloratus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
T7SS_signal
DUF6531
TEN_YD-shell
RHS
OCRE
Motif
Other DBs
NCBI-ProteinID:
WMX48194
LinkDB
All DBs
Position
complement(6605676..6610451)
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AA seq
1591 aa
AA seq
DB search
MGIGDFISDITPDVVEDAVEDGVEWVGNRIEDAGNWTADRLEDVGWESGADWVREQSRSV
ANRLGAEVDEMDLGQTEDKTKLIYGSPGKINATADRLRAFQLSFDDTGDGLKGLDSSQLK
GETADALRTAVSTQPPKWWNAADACSKAIGALDRFADTVTWAQGRAQTAIDKWKEGVKAS
EAAADAHRKKVDAYNGAVDRYNAQPADKRDLSSLPPKPAPTFDDPGKKLMKEAQDILAEA
RRQRNSAAETARSAIRAARDMAPQKPSYAEQLRDGAEELQIMGDHVGGGIVKGTAGILNF
VRSVNPMDPYNLTHPAEYATSLNSLAAGLVVAVNDPVGTGKQMLDNFMKDPAEGFGRLIP
DIALTVATGGGGAAAKGVRVAEEAADAARLRKLVDDSPDGTHNRGDHERTSLGTDPVDLA
TGRMYLPQTDAEIPGILPLLFTRRTESGLTTGRFLGRAWSSTVDERLEVDAVGVVHVTAD
GLLITYPHPVPGSPTRSRSGRSRTLLSREADGDYALADPDSGLVRRFAAPRDAEPGGDGT
AWLSGLAERNGHTVTVERAEDGLPLALVHSAGHALRLATAGGLVTGLFVTGPGDTENAGV
PLMSYGYENGELTTVTRPSGAVTTFAYDERSRVVAWTDSNGCRYDYVYDDRDRVVAEGGE
AGHVQITLAYGEPDAATGHRTTVLTTADGRATRHLVGPGCRIVATTDALGHTTRYRHDAD
GNLLSRTNPLGATTGFGYDAEGRMVSAVRADGAELRVERGPFGLPTGVVGPDGARTAYTY
DERGNRTAVTDPAGNTTRSAYDGAGRLVSVTDALGHTTRVECDAAGLTVAVTDPGGGTTS
TERDVLGRPVRVTDPSGGVTVLEWSADGHLARRTGPDGVSESWTYDGEGNCLSHTDASGG
VTRYEYTHFDLPLATTRPDGTRHTFEHDRDLRLTRVTNAQGLSWSYTYDAVGNIVAETDF
DGRELRYRLDPEGRVAERTDALGGTIAFERDVLGQVVRKDVDGRVTTYAYDRAGRLLEAA
GPDGELCYQYDRRGRVKTESVDGRPTVYRYDELGRRVRRTTPTGHVTSYAYAADGLPLRL
TTGGREIGFTHDAGGRELTRVFGESLTLTSAWDEAGRLAARHVVSGSRTVLGRAYGYRAD
GRLTSVTDRLTGTRSYDLDPLGRVTAVRAPGGWTERYAYDEAGNQVAASWPDRHPGTEAV
GERAYSGTRITRAGAVRFEHDALGRIVLRQKSRLSRKPDTWRYAWDTENRLTSVTTPDGT
RWRYRYDPLGRRTAKQRLAADGESVVEEVRFTWDGLTLCEQTSHRLDDPHAVALTWDHRD
VVPLAQTERILTADSRQEEVDRRFFAIATDLVGTPTELIDESGAVAWRTRSTLWGATAWA
RDSAAYTPLRFPGQYYDPETGLHHNFFRHYDPETGRYASPDPLGLAPASNPVAYVDNPTG
GCDPLGLAPKCPEEKANKRAVKAADNVIDRAGDGRFRKHPDYHGDSMHRFSDERVLEILK
NPDAVYRSTGGAGNLIFRQGDDVVVTKGVGSEAGQAITAYGPSGVLGESGATAVGNGAKA
TDAGRPITHEDIVEGRIPGKNGFMPPAVQIR
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
gtggggatcggcgacttcatcagtgacatcacgccggacgtggtcgaggacgcggtcgag
gacggcgtcgaatgggtcggcaaccgcatcgaggacgcgggcaactggaccgccgaccgg
ctggaggacgtcggctgggagtccggcgccgactgggtgcgcgagcagtcccgttcggtc
gccaaccggctcggcgccgaggtcgacgagatggacctcgggcagaccgaggacaagacc
aagctgatctacggcagtccgggcaagatcaacgccacggcggaccgcctccgcgccttc
cagctgtccttcgacgacaccggcgacggtctcaagggcctggactcctcgcagctcaag
ggcgagacggccgacgcgctgcggaccgccgtgagcacccagccgcccaagtggtggaac
gccgccgacgcctgctccaaggcgatcggcgcgctcgaccggttcgccgacaccgtcacc
tgggcgcaggggcgggcgcagacggccatcgacaagtggaaggagggcgtcaaagcctcc
gaggccgccgccgacgcccaccgcaagaaggtcgacgcctacaacggcgccgtcgaccgc
tacaacgcacagcccgccgacaagcgcgacctgtcctcgctgccgccgaagcccgccccg
acgttcgacgacccgggcaagaagctgatgaaggaggcgcaggacatcctcgccgaggcg
cgcaggcagcggaactcggccgccgagaccgcgcgttcggcgatccgcgccgcccgggac
atggcgccgcagaagccctcgtacgccgagcagctgcgcgacggcgccgaggagctgcag
atcatgggcgaccacgtgggcggagggatcgtcaagggcacggcgggcatcctgaacttc
gtccgctcggtcaacccgatggatccgtacaacctcacgcatccggccgagtacgcgacc
tcgttgaacagtctggccgcgggcctggtggtggccgtcaacgacccggtcggcaccggc
aagcagatgctcgacaacttcatgaaggacccggcggagggcttcggccggctgatcccg
gacatcgctctgacggtcgccaccggtggaggcggcgccgcggcgaagggcgtgcgggtc
gccgaggaggcggcggacgcggcgcggctgcgcaagctggtcgacgacagcccggacggc
acccacaaccgcggcgaccacgagcgcaccagcctcggcacggacccagtggacctcgcc
acgggccggatgtacctgccgcagaccgatgcggagatcccggggatcctgccgctgctg
ttcacccggcgcacggagtccgggctgaccacgggccgcttcctggggcgggcctggtcg
tccaccgtcgacgagcggctggaggtcgacgccgtcggcgtcgtccacgtcaccgccgac
gggctcctgatcacctatccgcacccggtgcccggctcacccacccgctcccgctccggc
cggagccgcacgctgctctccagggaggcggacggcgactacgcgctggccgatcccgac
tccggcctggtgcgccgcttcgccgccccgcgggacgcggagcccggtggcgacggcacg
gcctggctgtcggggctcgccgaacgcaacggacacacggtgaccgtggagcgcgccgag
gacggactgccgctcgccctggtccactcggccgggcacgcgctgcggctggccacggcc
ggcggcctggtcaccggcctgttcgtgaccgggccgggcgacacggagaacgcgggcgtc
ccgctgatgtcgtacggctacgagaacggcgaactgaccacggtgacacggccgtcgggc
gccgtcaccaccttcgcgtacgacgagcggagccgggtcgtcgcctggaccgactccaac
ggatgccgctacgactacgtgtacgacgaccgggaccgggtggtcgcggagggcggcgag
gccgggcacgtccagatcaccctggcgtacggcgaaccggacgccgcgaccggccaccgg
acgacggtactgaccaccgccgacgggcgggcgacccggcatctggtcggcccgggctgc
cggatcgtggccaccacggacgcgctgggccacacgacgcggtaccgccacgacgccgac
ggcaatctcctctcccgtaccaacccgctgggcgccaccaccggcttcgggtacgacgcg
gagggccggatggtctcggccgtccgcgcggacggagccgaactccgcgtggaacgcggc
ccgttcgggctgccgaccggggtcgtgggtccggacggggcccgtacggcgtacacgtac
gacgagcgcggcaaccggacggcggtcaccgacccggcggggaacacgacgcgttccgcc
tacgacggggccggccggctcgtctcggtcacggacgccctcgggcacaccacccgggtg
gagtgcgacgcggcggggctgaccgtcgcggtgaccgacccgggcggcggcaccacgagc
acggagcgggacgtgctcggccgtccggtccgggtcaccgacccgtcgggcggggtcacc
gtcctggagtggagcgccgacggccacctcgcccgccgtaccggtcccgacggcgtctcg
gagtcgtggacgtacgacggcgagggcaactgcctgagccacaccgacgcttcgggcggt
gtgacccgctacgagtacacccacttcgacctgccgctcgccaccacccgccccgacggc
acccgccacaccttcgagcacgaccgcgacctgcggctcacccgggtcaccaacgcccag
ggcctgagctggagttacacctacgacgcggtcggcaacatcgtggccgagaccgacttc
gacgggcgcgagctgcgctaccgcctggacccggagggccgggtcgccgagcggaccgac
gcgctcggcgggacgatcgccttcgagcgggacgtgctcgggcaggtggtccgcaaggac
gtcgacggccgggtgacgacgtacgcgtacgaccgcgcgggccggctcctggaggcggcc
gggccggacggtgaactgtgctaccagtacgaccgccgcggcagggtcaagaccgagtcg
gtggacggccggcccacggtgtaccgctacgacgagctgggccggcgcgtccgccgcacc
acgccgaccggtcacgtcacctcgtacgcctatgccgccgacggacttccgctgcggctg
accacgggcggccgggagatcggcttcacccacgacgccggggggcgcgaactgacccgg
gtcttcggggagtcgctcaccctgacctcggcctgggacgaggccggccggctcgccgcc
cggcacgtcgtctccggatcccggacggtgctcggtcgcgcgtacggctaccgcgccgac
ggccggctgacctcggtcaccgaccggctcaccggcacccgcagctacgacctcgacccg
ctggggcgggtcaccgccgtccgcgcaccgggcggctggacggagcggtacgcgtacgac
gaggccggcaaccaggtcgcggcgtcctggccggaccggcacccgggcaccgaggccgtc
ggcgaacgcgcctactccggaacccggatcacccgcgcgggcgccgtccgcttcgagcac
gacgcgctcgggcggatcgtgctccggcagaagagccggctgtcccgcaaacccgacacg
tggcgctacgcctgggacaccgagaaccgtctcacctccgtcaccacgcccgacggcacc
cgctggcgctaccgctacgacccgctgggccgccgcaccgcgaagcagcggctcgcggcg
gacggcgagagcgtcgtggaggaggtccggttcacctgggacggactcaccctgtgcgaa
cagaccagccaccgcctcgacgacccgcacgcggtcgccctgacctgggaccaccgggac
gtcgtgccgctggcgcagaccgagcggatcctcacggcggacagccggcaggaggaggtc
gaccgtcgcttcttcgccatcgccaccgacctcgtcggcacgccgaccgagctgatcgac
gagtcgggcgccgtcgcctggcgcacccgcagcacgctgtggggcgccacggcctgggcc
cgcgacagcgccgcgtacaccccgctgcgcttccccggtcagtactacgaccccgagacc
ggcctccatcacaacttcttccggcactacgaccccgagaccggccgctacgcctccccc
gatccgctgggcctggcgcccgcgtcgaaccccgtcgcctacgtcgacaacccgaccggt
ggctgcgacccgctgggcctcgcgcccaagtgcccggaggagaaggcgaacaagcgggcg
gtcaaggcggcggacaacgtcatcgaccgggccggcgacggccgcttccgcaagcacccg
gactaccacggcgactcgatgcaccgcttcagcgacgagcgggtcctggagatcctcaag
aacccggacgccgtctaccgctcgacgggcggagccggaaacctcatcttccgccagggc
gacgacgtcgtcgtgaccaagggcgtcggctcggaggcgggccaggccatcaccgcgtac
ggcccgtccggcgtcctgggcgagtccggggcgacggcggtcggcaacggggccaaggcc
acggacgccggacggccgatcacccacgaggacatcgtggagggcaggattccgggcaag
aacggcttcatgcctccggccgtgcagatcagatga
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