Streptomyces roseicoloratus: RGF97_30290
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Entry
RGF97_30290 CDS
T09671
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sroc
Streptomyces roseicoloratus
Pathway
sroc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGF97_30290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sroc03400
]
RGF97_30290
Enzymes [BR:
sroc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RGF97_30290
DNA repair and recombination proteins [BR:
sroc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RGF97_30290
Prokaryotic type
RGF97_30290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WMX48233
LinkDB
All DBs
Position
complement(6663721..6664398)
Genome browser
AA seq
225 aa
AA seq
DB search
MAARPLNEIVEAGWAHALAPVAERIAAMGDFLRQEIASGRTYLPSGANVLRAFQQPFDEV
RVLIVGQDPYPTPGHAVGLSFSVAPEVHPLPPSLENIFREMHTDLGLPRPSNGDLTPWTR
QGVLLLNRALTTAPRRPGAHRDKGWEAVTEQAIRALAARGKPLVSVLWGRDARNLRPLLG
DLPAIESSHPSPMSADRGFFGSRPFSRTNELLLRQGAEPVDWQLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcacgaccgttgaacgaaatcgtcgaggccgggtgggcgcacgcgctcgcgccg
gtggccgaacgcatcgccgcgatgggcgacttcctccggcaggagatcgcctccgggcgc
acctacctgccctcgggggcgaacgtcctgagggcgttccagcagcccttcgacgaggtg
cgggtcctcatcgtcggccaggacccctatccgacgcccggccatgccgtgggcctgagc
ttctccgtggcaccggaggtgcacccgctgccgccgagcctggagaacatcttccgggag
atgcacaccgacctgggtctgccccggccgtccaacggcgacctcacgccgtggacccgg
cagggcgtcctgctgctcaacagggcgctcaccacggcaccgaggcggcccggagcgcac
cgcgacaagggctgggaggcggtcaccgagcaggccatccgggccctcgcggcgcgcggc
aagccgctcgtctcggtgctgtggggccgggacgcccgcaatctgcgcccgctgctcggc
gacctgccggccatcgagtcctcgcacccctcgccgatgtccgccgaccgcggcttcttc
ggctcgcggccgttcagccgcaccaacgaactgctgctccgccagggcgccgagccggtg
gactggcagctgccgtga
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