Streptomyces roseicoloratus: RGF97_31035
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Entry
RGF97_31035 CDS
T09671
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sroc
Streptomyces roseicoloratus
Pathway
sroc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGF97_31035 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sroc03019
]
RGF97_31035 (recQ)
03400 DNA repair and recombination proteins [BR:
sroc03400
]
RGF97_31035 (recQ)
Enzymes [BR:
sroc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RGF97_31035 (recQ)
Messenger RNA biogenesis [BR:
sroc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RGF97_31035 (recQ)
DNA repair and recombination proteins [BR:
sroc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RGF97_31035 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WMX48344
LinkDB
All DBs
Position
6825590..6827617
Genome browser
AA seq
675 aa
AA seq
DB search
MALTDASPDTTDALRVLHRVFGYGSFRGEQQEIIEQVVAGGDALVLMPTGGGKSLCYQIP
ALVRDGTGVVISPLIALMQDQVDALTALGVRAGFLNSTQDPYERQAVEQAFLADELDLLY
LAPERLRTEGTQRLLDRGKVSLFAIDEAHCVAQWGHDFRPDYLALSMLHERWPKVPRIAL
TATATEATHAEIATRLGLTDARHFVASFDRPNIQYRIVPKNNPLKQLLELIRTEHDGDAG
VVYCLSRSSVEKTAAFLVEQGIDAVPYHAGMDAAARAANQSRFLREDGVVVVATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGEPATAWLAYGLQDVVQQRKLIDGSEGDE
THRRSLAAHLDAMLALCETVDCRRVRLLAYFGQSAEPCGNCDTCLTPAESWDGTVAAQKL
LSTVWRLARERRQKFGAGQIIDILQGKKTAKAIQFDHDQLSVFGVGADLSTAEWRGVVRQ
LLALGLLAVEGDYGTLVLTDGSGEVLGGRRQVSMRKETAPARSARKESGSGSRSGKGARV
PADLPEAAVPVFEALRAWRAATAREQGVPAYVVFHDATLREIATRLPTTVEELGTVGGVG
EAKLTKYAEGVLDALAEHTAGAGPSAAPGGPAADSGAAGSGPVSAAVPAPARPAVQDDEP
PFDFDEIEPPWDDWE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggccctcaccgacgcttccccggacaccacggacgccctgcgggtactgcaccgcgtc
ttcggttacggctccttccgcggcgagcagcaggagatcatcgagcaggtcgtcgcaggc
ggcgacgccctcgtgctcatgccgaccggcggcggcaagtcgctgtgctaccagatcccc
gcgctcgtcagagacggcaccggcgtcgtgatctcgccgctgatcgcgctcatgcaggac
caggtcgacgcgctcaccgcgctcggcgtgcgggccggtttcctcaactcgacccaggac
ccgtacgagcggcaggcggtcgagcaggccttcctcgccgacgagctcgacctgctctac
ctggcgcccgagcggctgcgcaccgagggcacgcagcggctgctcgaccggggcaaggtg
tcgctcttcgccatcgacgaggcgcactgcgtcgcccagtggggccacgacttccggccg
gactacctggccctgtccatgctgcacgagcgctggcccaaggtgccgcggatcgcgctg
accgccacggccaccgaggccacccacgccgagatcgccacccggctcggcctgacggac
gcccggcacttcgtcgccagcttcgaccggccgaacatccagtaccgcatcgtcccgaag
aacaacccgctcaagcagctcctcgaactgatccgcaccgagcacgacggggacgccgga
gtcgtctactgcctgtcccggtcctcggtggagaagaccgcggccttcctggtggagcag
ggcatcgacgccgtgccgtaccacgccggcatggacgccgcggcccgggcggccaaccag
tcgcgcttcctgcgggaggacggcgtcgtcgtggtcgccacgatcgccttcggcatgggc
atcgacaagcccgacgtccgcttcgtggcccacctcgacctgccgaagtcggtcgagggc
tactaccaggagaccggccgcgccgggcgcgacggcgagccggcgaccgcctggctcgcg
tacggcctgcaggacgtcgtccagcagcgcaagctcatcgacggctccgagggcgacgag
acgcaccgccgctcgctggccgcgcacctggacgcgatgctcgccctgtgcgagacggtc
gactgccggcgcgtccggctcctcgcctacttcggccagtccgccgagccgtgcggcaac
tgcgacacctgcctgaccccggccgagtcctgggacggcacggtcgccgcgcagaaactg
ctgtccacggtgtggcggctggccagggagcggcggcagaagttcggcgccggccagatc
atcgacatcctgcagggcaagaagacggccaaggccatccagttcgaccacgaccagctc
tcggtgttcggcgtcggcgccgacctgtccaccgcggaatggcggggcgtggtgcgccag
ctgctcgccctggggctgctcgccgtcgagggcgactacgggacgctcgtcctgacggac
ggcagcggcgaggtcctcggcggccgccgtcaggtctcgatgcgcaaggagacggccccg
gcccgttccgcccgcaaggagtccggatccggctcgcgctccgggaagggcgcccgggtg
cccgccgacctgccggaggccgcggtgccggtgttcgaggccctgcgcgcctggcgggcc
gcgaccgcccgcgagcagggcgtcccggcgtacgtcgtgttccacgacgcgacgctgcgg
gagatcgcgaccaggctccccaccacggtcgaggaactgggcacggtcggcggagtcggc
gaggccaagctgaccaagtacgccgagggcgtcctggacgccctggcggaacacacggcc
ggcgccgggccctcggccgcgcccggcggcccggccgccgactccggtgccgcgggttcc
ggtccggtctccgccgccgtgcccgcgccggcgcggccggcggttcaggacgacgagccg
ccgttcgacttcgacgagatcgagccgccctgggacgactgggagtag
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