Streptomyces roseicoloratus: RGF97_31525
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Entry
RGF97_31525 CDS
T09671
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sroc
Streptomyces roseicoloratus
Pathway
sroc00630
Glyoxylate and dicarboxylate metabolism
sroc00680
Methane metabolism
sroc01100
Metabolic pathways
sroc01120
Microbial metabolism in diverse environments
sroc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RGF97_31525 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
RGF97_31525 (fdhF)
Enzymes [BR:
sroc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RGF97_31525 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
Fer4_Nqo3
Fer2
Fer4_7
Fer4_21
Fer4
Fer4_9
Fer4_10
Fer4_8
Fer4_2
Fer4_6
Fer4_13
Fer4_4
Fer4_16
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
WMX48426
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Position
6943512..6946211
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AA seq
899 aa
AA seq
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MTRLQVDGRTVELPAGATLLDAARAAGAELPTLCHDDRLRSAGSCRTCLVQADGRTVAAC
VTPATPGMTVDASGEEVRNLRRDAVALIASALPPHALADDAPSELAEMCRTLSIEPDIAG
TPLTPLRGRDDTHPYVHLDRDLCIACGRCVRMCSDVQGTFALTLTGRGADTVVAPGTGGA
WADSDCVACGGCVDTCPTGAITQPGPGQGFTSRQPDPDRVRTTCGYCGVGCALDVVVRDD
RVAAVLPAPDGPVNRGHACVKGRFSYGYLTSAERLTEPLVRRNGALTPVSWDEAIGVVAD
GLRAAVEQGGPDAVAAISSARATNEENYLVQKFLRTVIGTNNVDNCSRLCHAPSAAGLTA
SFGRAGGTDPFDDVETADCFLVVGANPVEAHPVVGARLLQRALGGAALIVADPRAVGLAR
HADLHLRPRPGTNVALFHGLAHVLIAEGLTDPDFLRDRATGLDELTTLLTDYPPTRVAEI
TGVPAEDVTAAARLYGRAERPAVIYGLGVTEHLHGTDGVRTLANLPILRGAVGGTGHGFG
ISPLRGQNNVQGASDMGALPDLLPGYRRVTDPEARARAEAVWGRPVPPTPGLRIPEMFTA
ARESRLRALWVIGEDVCATDPDSRRVAEALDACPLVVVNELFLSETARHADVVLPVASWL
EKDGTFVNFDRRFQRVRAAVRPPGMARTDFDVIQAVAAAMGSDLGCRTPADALSECGRAA
PVFAGLSHARLDREGAVPWPCSSPDRAGEATLYAEEFATPDGRAHLSAAPYLPPGEEPDA
DYPLLLVTGRRWAHYNSGSMTRRGGNLLLDARGLLDLHPEDAARYGVRDGAPVTVDSRHG
QARLIARVGPDLAPGQVFCAFHFPDEGVNSLTSEHADAVTSCPEYKVTAVRLRPTVPED
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcctccaggtcgacggtcgcacggtcgaactgcctgccggagcgacgctgctc
gacgcggcacgggccgccggcgccgagctgcccacgctctgccacgacgaccgcctccgt
tcggccggctcctgccggacctgcctcgtccaagccgacgggcggaccgtcgcggcctgc
gtcacccccgccacaccgggcatgacggtggacgcctccggcgaagaggtacggaacctg
cgccgggacgccgtcgccctcatcgcctcggcgctcccgccgcatgcgctcgcggacgac
gctcccagcgaactcgcggaaatgtgccggacgttgagcatcgagcccgacatcgccggg
acacccctgacacccctgcgcgggcgcgacgacacgcacccgtacgtccatctcgaccgg
gatctgtgcatcgcctgtggacgctgcgtccgcatgtgctccgacgtgcagggaaccttc
gcgctgacccttaccggccgcggcgccgacacggtcgtcgcccccggcacgggcggtgca
tgggccgactccgactgcgtggcctgtggcggctgcgtcgacacgtgccccacgggcgcg
atcacccagcccgggcccggtcagggcttcacctcccggcagccggatcccgaccgggtc
cgcaccacgtgcgggtactgtggtgtcggctgcgccctcgacgtcgtcgtccgcgacgat
cgggtcgcggccgtgcttcctgccccggacgggccggtcaaccgggggcacgcttgcgta
aagggccgtttctcgtacgggtacctcacctcggccgaacgcctcaccgaacccttggtc
cgccgcaacggagccctgacacccgtgagctgggacgaggcgatcggcgtcgtcgcggac
ggactgcgcgccgccgtcgagcagggcgggcccgacgcggtcgccgcgatctcctcggcc
cgcgccaccaacgaggagaactacctcgtacagaagttcctgcggaccgtgatcggcacc
aacaacgtcgacaactgctcccgcctgtgccacgcaccctccgcggccggactcacagcg
tccttcgggagggcgggcggcaccgatcccttcgacgacgtcgagaccgctgactgcttc
ctcgtcgtcggcgccaaccccgtcgaagcccacccggtcgtcggcgcccgactcctccaa
cgggcactcggcggtgccgccctgatcgtggcggacccacgagccgtcggtctcgcccgg
cacgccgacctccatctgcgcccccggcccggcaccaacgtcgccctcttccacggcctc
gcccacgtcctgatcgccgagggtctgaccgaccccgacttcctccgtgatcgcgccacc
ggactcgacgaactcaccacgctcctgaccgactacccgcccacacgcgtcgccgagatc
accggtgtcccggccgaggacgtcaccgccgccgcccggctctacggccgggccgaacgc
cccgccgtcatctacggactcggcgtcaccgaacacctccatggcaccgacggcgtacgc
accctggccaacctgcccatcctgcgcggcgcggtcggcggcaccggacacggattcggc
atcagcccgctccgcggccagaacaacgttcagggcgcgtcggacatgggcgcgctgccg
gacctcctgcccggctaccgccgcgtcaccgaccccgaagcccgcgcccgcgcagaggcg
gtgtggggtcggccggtcccgccgacgcccgggctgcgcatccctgagatgttcacggcc
gcccgagagagccggctacgggccctgtgggtcatcggcgaggacgtgtgtgccaccgac
ccggacagccggcgcgttgccgaggccctcgacgcctgcccgctggtcgtcgtcaatgaa
ctgttcctcagtgagaccgcccggcacgcggacgtcgtcctgcccgtggcctcgtggctg
gagaaggacgggaccttcgtcaacttcgaccgccggttccagcgtgtacgcgccgccgtc
cggccgcccggtatggcccgcaccgacttcgacgtcatccaggccgtcgccgccgcgatg
ggctccgacctcggctgccgcacgcctgccgatgcgctctccgagtgcgggcgggcggcc
cccgtcttcgccggcctctcgcacgcccgcctcgaccgtgagggcgctgtgccctggccg
tgctcctcgccggaccgagccggcgaagccaccctgtacgccgaggaattcgcgaccccg
gacggccgcgcccatctctccgccgccccctacctgccgcccggcgaggaaccggacgcc
gactacccgctcctccttgtcacggggcgccgctgggcccactacaactccggcagcatg
acccggcgcggtggaaacctcctgctcgacgcccgcgggctgctggacctgcatcccgag
gacgcggctcggtacggggtgcgagacggcgcccccgtcaccgtcgacagccgccacggg
caggcgcggctgatcgcccgagtcggccctgacctcgcccccggtcaggtcttctgcgcg
ttccacttcccggacgagggcgtcaactccctcacgtcggagcacgccgacgccgtgacc
tcgtgcccggagtacaaggtcacggcggtacggctgcggcccaccgtgccggaggactga
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