Skermanella rosea: JL101_000470
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Entry
JL101_000470 CDS
T07666
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
sroe
Skermanella rosea
Pathway
sroe00280
Valine, leucine and isoleucine degradation
sroe00650
Butanoate metabolism
sroe00907
Pinene, camphor and geraniol degradation
sroe01100
Metabolic pathways
sroe01120
Microbial metabolism in diverse environments
sroe04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JL101_000470
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JL101_000470
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JL101_000470
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JL101_000470
Enzymes [BR:
sroe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
JL101_000470
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
UEM06735
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All DBs
Position
106226..107125
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AA seq
299 aa
AA seq
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MKSQIKIVEVGPRDGLQNEKRIVPAAVKIELIDRLSEAGLPVVESGAFVSPKWVPQMADT
AEVLAGIHRRAGVSYPVLVPNAKGLEAAIAAGVDEIAIFGAASESFSRQNINCSIDESFE
RFRPVVETALRHGIRVRGYVSCVLGCPYEGPIEPAVVADVSERMMKLGCYEVSLGDTVGV
GTPGQARDLIDTVVQAVPIDRLAVHFHDTYGQALANILATLEAGIGVIDSSVAGLGGCPY
AKGAAGNVATEDVLYMLNGLGIETDVDLDRVAATGVWISEQLGRPNASKVGRAMAGATS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ctgaagagccagatcaagatcgtcgaggtcggcccgcgcgacggtctgcagaacgagaag
cggatcgttccggcggcggtaaagatcgagctgatcgaccgcctgagcgaggccgggctg
ccggtcgtggagtccggggccttcgtgtctcccaaatgggttccgcagatggccgacacc
gccgaggtactggccggcatccatcgccgggccggcgtctcctatccggtgctggtgccc
aatgccaagggcctggaggcggcgatcgccgccggcgtggacgagatcgcgatcttcggc
gccgcgtccgagtcgttcagccgccagaacatcaactgttcgatcgacgagagcttcgag
cgtttccggccggtcgtcgagaccgcgctgcgccacggcatccgggtccggggatatgtc
agctgcgtcctgggctgcccctacgaggggccgatcgagcccgctgtcgtggccgacgtg
tccgagcgcatgatgaagctcggctgctacgaggtctcgctgggcgacacggtcggcgtc
ggcacgccggggcaggcgcgcgacctgatcgacaccgtcgtgcaggcggtgccgatcgac
cggctggcggtccatttccacgatacctacggccaggcgctcgccaacatcctggcgacc
ctggaggccgggatcggcgtgatcgacagctcggtggccggcctgggcggctgcccctac
gccaagggtgccgccggcaacgtcgcgaccgaggacgtgctctatatgctgaacggcctc
ggcatcgaaacggacgtggacctggaccgggtcgccgccaccggcgtctggatctccgaa
cagctcgggcggcccaacgcctccaaggtcggccgcgccatggcgggggcgacatcctga
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