Skermanella rosea: JL101_001180
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Entry
JL101_001180 CDS
T07666
Name
(GenBank) ribulose bisphosphate carboxylase small subunit
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
sroe
Skermanella rosea
Pathway
sroe00630
Glyoxylate and dicarboxylate metabolism
sroe00710
Carbon fixation by Calvin cycle
sroe01100
Metabolic pathways
sroe01110
Biosynthesis of secondary metabolites
sroe01120
Microbial metabolism in diverse environments
sroe01200
Carbon metabolism
Module
sroe_M00165
Reductive pentose phosphate cycle (Calvin cycle)
sroe_M00612
Anoxygenic photosynthesis in purple bacteria
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JL101_001180
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
JL101_001180
Enzymes [BR:
sroe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
JL101_001180
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Paralog
Gene cluster
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Motif
Pfam:
RuBisCO_small
Motif
Other DBs
NCBI-ProteinID:
UEM04085
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All DBs
Position
complement(252572..252988)
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AA seq
138 aa
AA seq
DB search
MRLTQGQFSFLPDLTDDEIKQQITYALSQGWAVAIESTDDPHPRNTYWDMWGTPMFDIVD
AAGVMMEVNACRKANKGKYVKVLAFDASKGFESIRMSFIIDRPAEEKGFELVRAEGPGRQ
VNYTVRSYATEKPMGARY
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgacccagggccagttctcgttccttccggacctgacggacgacgagatcaag
cagcagatcacctacgcgctcagccagggctgggccgtcgcgatcgaatccaccgacgat
ccccacccccgcaacacctattgggacatgtggggcacgccgatgttcgacatcgtcgac
gccgccggcgtgatgatggaggtcaacgcctgccgcaaggcgaacaagggcaaatacgtc
aaggtgctggccttcgacgcgagcaagggcttcgagagcatccgcatgtccttcatcatc
gaccgcccggccgaggagaagggcttcgagctggtccgcgccgagggacccggccgccag
gtcaactacaccgtccgcagctacgcgaccgagaagcccatgggcgcgcggtactga
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