Skermanella rosea: JL101_001190
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Entry
JL101_001190 CDS
T07666
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sroe03000
]
JL101_001190
Transcription factors [BR:
sroe03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JL101_001190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
Phosphonate-bd
HTH_IclR
HTH_24
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
UEM04087
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Position
254767..255705
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AA seq
312 aa
AA seq
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MTLRHSTIRQLQVFVEAAHTLSFARVAERLGLTPAAVSFQIKQIEGLCGFALFERVGRRV
VLTEAGAALLEYASVVLKALTDADERMQELKGLSGGHARIGLVSTAKYIMPRMLSRFQAE
YPRIAIHLHEGNRRDIIAALLSGEVDIAVMGKPPDDADVAADPFAPHPSVLIAPPGHRLA
GQKEIPLDGLAEERFIVREEGSGTRALMENFFRGAGFTPRIALTSSSNETIKQAVMAGMG
VALISRHTIVLELRMGLLTVLPVQGLPLMRSWFVAWRRHMPLLPVHTQLRRFLLAEGKSL
IAGIESAYRTEG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcggcattccacgatccgtcagctccaggtcttcgtggaggcggcgcacacg
ctgtccttcgcccgcgtggccgagcggctggggctgacgccggcggcggtgtcgttccag
atcaagcagatcgaggggctgtgcggcttcgccctgttcgagcgggtcggccgccgggtg
gtcctgacggaggccggggcggccctgctggaatatgcctcggtcgtcctgaaggcgctg
accgacgccgacgagcggatgcaggagttgaaggggctgagcggcggccacgcccggatc
ggcttggtcagcaccgccaaatacatcatgccccggatgctgtcgcgcttccaggccgag
tacccgcggatcgccatccacctgcacgagggcaaccgccgcgacatcatcgcggccctg
ctgtcgggggaggtggacatcgcggtcatgggcaagccgcccgacgacgccgacgtggcg
gccgaccccttcgccccgcatccgtccgtgctgatcgccccgccgggccaccggctggcg
ggccagaaggagatccccttggacgggctggcggaggaacgcttcatcgtccgcgaggaa
gggtccggcacccgcgcgctgatggagaacttcttccgcggcgccggcttcacgccccgc
atcgcgctgacgtcgagcagcaacgagacgatcaagcaggcggtcatggcggggatgggc
gtggcgctgatctcccgccacaccatcgtgctggagctgcgcatgggcctgctgaccgtc
ctgccggtgcagggcctgccgctgatgcggagctggttcgtggcctggcgccgtcatatg
cccctgctgccggtccatacccagctccgccgcttcctgctggccgagggaaagtcgctg
atcgccgggatcgagagcgcctatcgaaccgagggctga
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