Skermanella rosea: JL101_001270
Help
Entry
JL101_001270 CDS
T07666
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
sroe
Skermanella rosea
Pathway
sroe00860
Porphyrin metabolism
sroe01100
Metabolic pathways
sroe01110
Biosynthesis of secondary metabolites
sroe01120
Microbial metabolism in diverse environments
sroe01240
Biosynthesis of cofactors
Module
sroe_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
sroe_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
JL101_001270 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sroe04147
]
JL101_001270 (hemB)
Enzymes [BR:
sroe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
JL101_001270 (hemB)
Exosome [BR:
sroe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
JL101_001270 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
UEM06527
LinkDB
All DBs
Position
complement(271167..272144)
Genome browser
AA seq
325 aa
AA seq
DB search
MRPRRNRADAWTRRLVAENRLSTDDLILPVFSLDGENRREPVASMPGVERLSLDLLVGHV
AQAVELGIPAVALFPVTPNELKTPDGAEAANPDNLMCRTIRTLKSQFPDLGLVGDVALDP
YTSHGHDGLVRDGVILNDETVEVLVAQALAQADAGIDILAPSDMMDGRIGAIRDALDARN
HQLVRICSYAAKYASAFYGPFRDALNSGGLLKGDKRTYQMDPANTDEALREVALDLQEGA
DMVMVKPGMPYLDIVSRVKQTFSVPTFVYQVSGEYAMLKAATANSWLDNDRVVMETLLGF
KRAGADAILTYSAIEAAKLLREMRG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgcgccgcaaccgcgcggatgcctggacccgccggctggtcgccgagaaccgg
ctgagcaccgacgacctgatcctgccggtgttctcgctcgacggcgagaaccggcgcgag
ccggtggcatcgatgcccggcgtggagcgcctgtcgctggacctgctggtcggccacgtg
gcgcaggccgtggagctgggaatccccgcggtggccctgttcccggtcacgccgaacgag
ctgaagaccccggacggcgccgaggccgccaaccccgacaacctgatgtgccgcacgatc
cgcacgctcaagagccagttcccggacctgggcctggtcggcgacgtggcgctcgacccc
tataccagccacggccacgacgggctggtgcgcgacggcgtgatcctgaacgacgagacg
gtggaggtgctggtcgcccaggcgctggcccaggccgacgccggcatcgacatcctggcg
ccgtccgacatgatggacggcaggatcggcgccatccgcgacgcgctggacgcgcgcaac
caccagctcgtccgcatctgctcgtacgccgccaagtacgcctcggccttctacggcccg
ttccgcgacgcgctgaactcgggcgggctgctgaagggcgacaagcgcacctaccagatg
gacccggccaacaccgacgaggccctccgcgaggtggccctcgacctccaggaaggcgcc
gacatggtcatggtcaagccgggcatgccctacctggacatcgtgtcccgcgtgaagcag
accttctcggtcccgaccttcgtctatcaggtcagcggcgagtacgcgatgctgaaggcc
gcgacggccaacagctggctggacaacgacagggtcgtgatggaaaccctgctgggcttc
aagcgcgccggcgccgacgcgatcctgacctactcggcgatcgaggcggccaagctgctg
cgcgagatgcgggggtga
DBGET
integrated database retrieval system
