Skermanella rosea: JL101_001605
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Entry
JL101_001605 CDS
T07666
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sroe03021
]
JL101_001605
Transcription machinery [BR:
sroe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JL101_001605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
Sigma70_r1_2
HTH_23
UCR_14kD
HTH_28
HTH_11
HTH_3
DUF2390
Motif
Other DBs
NCBI-ProteinID:
UEM04165
LinkDB
All DBs
Position
complement(336698..337585)
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AA seq
295 aa
AA seq
DB search
MAHIDDPETQRANLTFIKASMREPLLSRDHEFELARNWREDGNESALHDLVRAYTRLVVS
TASRFRNYGLPMGDLVQEGNVGLMQAAARFEPDREVRFSTYAAWWIRSAMQDYILRNWSI
VRTGTTAAQKSLFFNLRRLRAKIEDASSNGALTQAGRVKIATELKVEVHEVEAMEMRLSG
ADQSLNAPISDSSEDDWQDFLADQRPSPEDVVIGMRDSNTRSKWLAEALGELSPRERTII
AQRRLRDDGATLEELGKELGVSKERVRQLEHRAMLKLKESMMRRVELSSDLLLEI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctcatatcgatgacccggaaacacagcgggccaatctgactttcatcaaggcctcg
atgcgggaacctctcctttcccgcgaccacgaattcgaactggcacgcaactggcgggaa
gacggcaacgagtcggcacttcacgatctcgtccgcgcctatacccgtctggtcgtctcc
accgcgtcccgcttccggaactacggcctgcccatgggggacctggtccaggagggcaat
gtcggcctgatgcaggccgccgcccggttcgagccggaccgcgaggtacggttctcgacc
tatgccgcctggtggatccgctcggccatgcaggactatatcctgcgcaactggtcgatc
gtgcggaccggtaccaccgccgcccagaagagcctgttcttcaacctgcgccgcctgcgc
gccaagatcgaggacgcgtccagcaacggcgccctgacccaggccggccgggtgaagatc
gcgaccgaactgaaggtcgaggtccatgaggtggaggcgatggagatgcgcctgagcggc
gccgaccagtcgttgaacgccccgatcagcgacagcagcgaggacgactggcaggatttc
ctcgccgaccagcgtcccagccccgaagacgtcgtgatcggcatgcgggacagcaacaca
cgctccaagtggctcgccgaagccctgggcgagctgagcccccgcgagcggaccatcatc
gcccagcgtcgcctgcgcgacgacggagccaccctggaggagttgggcaaggaactgggc
gtcagcaaggagcgcgtccgccagctcgagcaccgcgcgatgctcaagctcaaggagtcc
atgatgcgccgggtggaactgtccagcgaccttctcctggagatctga
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