Skermanella rosea: JL101_002370
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Entry
JL101_002370 CDS
T07666
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sroe03016
]
JL101_002370
Enzymes [BR:
sroe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
JL101_002370
Transfer RNA biogenesis [BR:
sroe03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
JL101_002370
Prokaryotic type
JL101_002370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
UEM04312
LinkDB
All DBs
Position
complement(499529..500440)
Genome browser
AA seq
303 aa
AA seq
DB search
MFEITFLGTAASVPSAGRGLSSLLVEHGRRRFLIDCGEGTQRQLMASGLGFRRLDTVLLT
HGHLDHLLGLGGLAGTLNLWRSTERLAIHAGRAPLRLARRLLEDVVWPDGPPRLGLDWRE
LSPGPLLAARDLTVTAFPVHHVAPDCFGFLFEETPRRHLLADRLDALGVPAGEARGRLAR
GEAVVLPDGRRVEPGQVTGPERRGRRVAVVGDAGSTAGLLEHVRGVDLLVIEATFLDADR
DKAEARSHLTVGQATGLARDAGVGELWLNHQSARYPAGAVEAEARAGFGRVRVAADFDRV
AVG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagatcaccttcctgggcaccgcggccagcgttccctcggccggccgtggcctg
tcctccctgctggtggagcatggccgccggcgcttcctgatcgactgcggcgagggcacc
cagcgccagctgatggcgagcgggctgggcttccgccggctcgacaccgtcctgctgacc
cacgggcacctggaccacctgctcgggctgggcgggctggccgggacgctgaacctgtgg
cggagcacggagcggctggcgatccatgccggccgcgcgccgctccgtctcgcccggcgc
ctgctggaggacgtcgtctggccggacggcccgccccgactggggctggactggcgggaa
ctgtcgcccggccccctgctggccgcgcgcgacctgaccgtgaccgccttcccggtccac
cacgtggcgccggactgcttcggcttcctgttcgaggagaccccgcgccggcacctgctc
gccgaccggctggacgcgctgggggtgccggccggcgaggcgcgggggcggctggcccgc
ggcgaggcggtcgtcctgccggacgggcggcgcgtcgagccgggccaagtgacgggtccc
gagcggcgcggccgccgggtcgcggtggtcggcgacgccggcagcaccgccggcctactg
gagcatgtccggggcgtcgacctgctggtgatcgaggccactttcctggacgccgaccgg
gacaaggccgaggcgcggagccacctgaccgtcggccaggcgaccggcctggcccgcgac
gccggcgtgggcgagctgtggctgaaccaccagtcggcccgctatcccgccggcgcggtg
gaggcggaggcgcgggccgggttcggccgggtccgcgtcgccgccgacttcgaccgggtc
gccgtgggatga
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