Skermanella rosea: JL101_002690
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Entry
JL101_002690 CDS
T07666
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sroe
Skermanella rosea
Pathway
sroe00061
Fatty acid biosynthesis
sroe00071
Fatty acid degradation
sroe01100
Metabolic pathways
sroe01212
Fatty acid metabolism
sroe02024
Quorum sensing
sroe04146
Peroxisome
Module
sroe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JL101_002690
00071 Fatty acid degradation
JL101_002690
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JL101_002690
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL101_002690
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sroe01004
]
JL101_002690
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sroe04147
]
JL101_002690
Enzymes [BR:
sroe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JL101_002690
Lipid biosynthesis proteins [BR:
sroe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JL101_002690
Exosome [BR:
sroe04147
]
Exosomal proteins
Exosomal proteins of breast milk
JL101_002690
Exosomal proteins of breast cancer cells
JL101_002690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UEM04365
LinkDB
All DBs
Position
complement(565788..567740)
Genome browser
AA seq
650 aa
AA seq
DB search
MDAGTVNGLPDLSLFDTFPKLLQVHARNHPDEVALRVKDLGIWHSLSWSQYQARVKGFAL
GLHHYGVGRGDVVGIVGDNRPDWVCAEIAAHAVGAMSLGMYRDALDEEIAYLVTYSDAKV
VFAEDEEQVDKLLELGDRIATVKLIVYSDPRGMRKHSDPRLVSVTELMHHGDAVASEFPA
LYDEMVAAGRGEDVAVLCTTSGTTANPKLAMLPAGRVIRHCASYLDVDAKGPRDEYVSVL
PLPWIMEQVYVLGKALLSRMTVNFVEEPETMMHDFREVGPTFVLFAPRVWEQIAADVRAR
IMDASPLKRRLYEYGMKVGLEALDKGKRSWLADLLLFRALRDRLGFSNLRSAATGGAALG
PETFRFFMAMGVPLRQLYGQTETLGAYTIHAQGDVDFDTVGKPFGKDIEVRIDNPDHNGV
GEIVTRHPNMFAGYFRNEAAGAADIRDGWMHTGDAGYFDKRGHLVVIDRIKDIATTGRGD
RFSPQYIENKLKFSPYVAEAVILGDQRDYLAAMICIRFPIVSKWAEKNRISFTTYTDLSS
RPEVYEMIRREVETVNATLPEAQRIAKFLLLYKELDADDGELTRTRKVRRGVIAEKYGTI
IDAIYAGRPSIDVDTTIAFQDGTRQRIRTVLKVVDLVPGSSAPASPKRAA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggacgccggaaccgtcaacgggctgcccgacctgtcgctgttcgacaccttcccgaag
ctgctccaggtccacgcgcgcaaccacccggacgaggtggcgctccgggtcaaggacctg
ggcatctggcacagcctgagctggagccagtaccaggcgcgggtcaagggtttcgcgctg
gggctgcaccattacggcgtcggccggggcgacgtggtcgggatcgtgggcgacaaccgg
ccggactgggtctgcgccgagatcgccgcccatgccgtgggcgccatgagcctgggcatg
taccgggacgcgctggacgaggagatcgcgtatctcgtgacctacagcgacgccaaggtg
gtgttcgccgaggacgaggagcaggtcgacaagctgctggagctgggcgaccggatcgcc
accgtgaagctgatcgtctacagcgacccgcgcggcatgcggaagcattcagacccgcgg
ttggtctccgtgaccgagctgatgcatcacggcgacgcggtcgcgtcggagtttcccgcc
ctgtacgacgagatggtggcggcgggacggggcgaggacgtggcggtgctgtgcaccacc
tcgggcacgacggccaaccccaagctggcgatgctgccggccggccgggtgatccggcac
tgcgcctcgtacctggacgtcgatgccaaggggccgcgggacgagtatgtctcggtgctg
ccgctgccctggatcatggagcaggtctatgtgctgggaaaggcgctgctgagccggatg
accgtgaacttcgtcgaggaacccgagacgatgatgcacgatttccgggaggtcgggccg
accttcgtgctgttcgccccgcgggtgtgggagcagatcgcggccgacgtccgcgcccgg
atcatggacgcctcgccgctcaagcggcgcctgtacgagtacgggatgaaggtggggctg
gaggcgctggacaagggcaagcggtcctggctggccgacctgctgctgttccgcgcgctg
cgcgaccggctgggattctccaacctgcgctcggccgcgaccggcggggcggcgctgggg
ccggagaccttccgcttcttcatggcgatgggcgtgccgctgcgccagctctacggccag
accgagacgctgggggcctatacgatccatgcccagggcgacgtggatttcgacaccgtc
ggcaagccgttcggcaaggacatcgaggtccggatcgacaaccccgaccacaacggcgtc
ggcgagatcgtgacccggcaccccaacatgttcgcgggctatttccgcaacgaggcggcg
ggggcggcggacatccgcgacggctggatgcataccggcgatgccggctatttcgacaag
cgcgggcatctggtggtgatcgaccggatcaaggacatcgccaccaccgggcggggcgac
cggttctcgccgcaatacatcgagaacaagctgaagttcagcccctatgtcgccgaggcg
gtgatcctgggcgaccagcgcgactatctcgccgcgatgatctgcatccgcttcccgatc
gtgtccaaatgggcggagaagaaccggatctccttcacgacctacaccgacctgtcgagc
cggccggaggtctacgagatgatccggcgcgaagtggagacggtcaacgcgaccctgccc
gaggcccagcgcatcgccaagttcctgctgctctacaaggagctggacgccgacgacggc
gaactgacccggacccgcaaggtgcgccgcggcgtgatcgcggagaagtacgggacgatc
atcgacgcgatctatgccggccggcccagcatcgacgtggacaccaccatcgccttccag
gacggcaccaggcagcgcatccggacggtcctgaaggtggtcgacctggtgccggggagc
agcgcgccggcctctccgaagcgggcggcgtga
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