Skermanella rosea: JL101_002885
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Entry
JL101_002885 CDS
T07666
Symbol
lptD
Name
(GenBank) LPS assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_002885 (lptD)
Transporters [BR:
sroe02000
]
Other transporters
Pores ion channels [TC:
1
]
JL101_002885 (lptD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_2
LptD_N
Motif
Other DBs
NCBI-ProteinID:
UEM04404
LinkDB
All DBs
Position
604691..606913
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AA seq
740 aa
AA seq
DB search
MKRPERGLRNSLRGGLVALGIAAAVGVPAASAQEAGGDQPVLLNADELTYDETLGIVTAT
GDVELAQGDRLLLADRVSFNERTSVVTATGNIRLLEPSGDVMFAEYAELTDDLAQGFVQQ
VRALLTDNSRLAGTEAERTDGGRFMRINRAVYSPCDLCAEDPTRAPLWQLRANRVVHDKE
AKEVVYRDARLEMFGIPVLYTPYFEHPDPTVDRKSGFLSPIFGYGGNLGTFAAVPYYWTI
APDMDATITPMFSTEDGLQVRGEWRQRFERGRLFLDGSIVNADRTTTSGEVKEDRWRGHL
FGEGLFDLDETWRAGFNLQQTSDRSYLRRYRISGEDILTSRAFVEGFQGRNYAVANAYRF
DDLRELYENEPYVIPLAEAQMLGEPDSLLGGRWSLDFGLVGLQRPEGRDTQRASIEAGWQ
RQFVADAGLITTVSGTLRGDAYYVTDYIRPDDPTGREDSTTDYRLFPQGQITMRYPVARQ
IGTVQHVIEPIVSFTTSPNVDDQDDIPNEDSQDIELTAYNLFRPNRFPGVDRLDSGTRVT
YGAKTGFYGFGGGFSEFFLGQSYQISRNDEALEASGLGEDYSDIVGSVRVQPGPYLDLQY
NFQLSEEDLEAQVQQFRVSAGVPLLRAGVNYYYRDRPTSGDTAPRREFLSASLSSSFSQY
WSAAVAQSYDLQATDEKLRSTSASLTYSDECFTFQVIGSRDNTVRSGEEGGDTIYFRLVF
RNLGEVEAPLISSSSQAASQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgtcctgaacggggactgcgcaacagcttgcgcggcggcctggtggccctggga
atcgcggcggcggtaggcgttcccgcggcatcggcgcaggaggccgggggcgaccagccc
gtgctgctgaacgccgacgagctcacctatgacgagaccctgggcatcgtgaccgccacg
ggcgacgttgaactggcccagggcgaccgcctgctgctggccgaccgcgtctccttcaac
gagcgcaccagcgtggtcaccgcgaccggcaacatccgcctgctggagccgagcggcgac
gtgatgttcgcggaatacgccgaactgaccgacgacctggcccagggcttcgtgcagcag
gtccgcgccctgctgaccgacaattcccggctggccgggaccgaggcggagcggaccgac
gggggccgcttcatgcggatcaaccgggcggtctattccccctgcgacctgtgcgccgag
gacccgacccgggcgccgctctggcagctccgggccaaccgcgtggtccacgacaaggag
gcgaaggaggtcgtctatcgcgacgcccggctcgagatgttcggcatcccggtgctgtat
acgccctatttcgagcatcccgacccgacggtggaccggaagagcggattcctgagcccg
atcttcggctatggcggcaatctcgggaccttcgcggcggtcccctactactggacgatc
gcgcccgacatggacgcgacgatcacgccgatgttcagcacggaggacgggctccaggtc
cgcggcgagtggcgccagcggttcgagcggggccgcctgttcctcgacggcagcatcgtc
aacgccgaccggacgacgacctcgggcgaggtgaaggaggaccgctggcgcgggcacctg
ttcggcgagggtctgttcgacctcgacgagacttggcgggcgggcttcaacctccagcag
acgtcggaccggtcctaccttcggcggtaccggatcagcggcgaggacatcctgaccagc
cgcgccttcgtcgaaggcttccagggccgcaactacgcggtcgcgaacgcctatcggttc
gacgacctgcgcgagctttacgagaacgagccctacgtgatcccgctcgccgaggcccag
atgctcggcgaacccgactcgttgctgggtgggcgctggtcgctggatttcggcttggtc
ggattgcagcgcccggaagggcgcgacacccagcgcgcctcgatcgaggcgggctggcag
cgccagttcgtcgccgacgcgggcctgatcaccacggtcagcggaaccctgcggggcgac
gcctattacgtcaccgactatatcaggccggacgatccgaccgggcgggaggacagcacg
accgactaccgcctgttcccgcaggggcagatcaccatgcggtatccggtggcgcgccag
atcggcacggtccagcacgtgatcgagccgatcgtctcgttcaccacctcgcccaacgtc
gacgaccaggacgacatcccgaacgaggacagccaggacatcgagctgaccgcctacaac
ctgttccgccccaaccgctttcccggcgtcgaccggctcgattcgggcacccgggtcacc
tacggcgccaagacgggtttctacggtttcggcggcggcttctcggaatttttcctgggg
cagagctaccagatctcccggaacgacgaggccctggaggcatcgggcctgggcgaggat
tattccgacatcgtcggcagcgtccgcgtccagcccggcccctacctggacctacaatac
aatttccagctctcggaggaggacctggaggcccaggtccagcagttccgcgtcagcgcc
ggcgttcccctgctgcgcgccggcgtcaactactactaccgcgaccggccgaccagcggc
gataccgcgccccgccgcgagttcctgtccgcgtccctcagttcttccttctcgcagtac
tggtccgcggccgtggcgcagagctacgacctccaggcgaccgacgagaagctgcgcagc
accagcgcctcgctgacctacagcgacgagtgcttcaccttccaggtcatcggatcgcgc
gacaataccgtccgctccggcgaggagggcggcgacacgatctatttccgcttggtgttc
cgcaacctgggcgaggtcgaagccccgctcatcagttcctcctcccaggcggcgtcccag
tag
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