Skermanella rosea: JL101_003550
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Entry
JL101_003550 CDS
T07666
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sroe
Skermanella rosea
Pathway
sroe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JL101_003550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sroe03400
]
JL101_003550
Enzymes [BR:
sroe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JL101_003550
DNA repair and recombination proteins [BR:
sroe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JL101_003550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UEM04531
LinkDB
All DBs
Position
complement(757304..757912)
Genome browser
AA seq
202 aa
AA seq
DB search
MTEPRTETELPFVDYQYPAKDPAGRRIAIIGEAPGAEEARTGKPFVGASGRLLDENLKSV
GLERAACLIGNTFRYQPPGNKVTHFFSSRTKARKMGVEVAEDLGPMGTSDYCLARYAGEV
EHLRRTLAEVKPAVIIALGRTPMWALTGQSGITALRGQELPCRLFADAIVIPTFHPSYIL
RGNRIEEPLFHADVKLAAERAG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaaccgcgtaccgagaccgagctgcctttcgtcgattaccagtatcccgccaag
gaccccgccggacgccggatcgccatcatcggcgaagcgcccggcgccgaggaggcccgc
accggcaagcccttcgtcggcgccagcggccggctgctggacgagaacctgaagtccgtc
gggctggagcgcgccgcctgcctgatcggcaacaccttccgctaccagccgccgggcaac
aaggtgacccacttcttctcgtcccgcaccaaggcgcgcaagatgggcgtcgaggtcgcg
gaggacctgggtcccatgggcacctccgactactgcctcgcccggtacgccggcgaggtg
gagcacctgcgccggaccctggccgaggtgaagcccgccgtgatcatcgcgctcggccgc
acgccgatgtgggcgctgaccggccagagcggcatcaccgcgctgcgcggccaggaactc
ccctgccgcctgttcgccgacgcgatcgtgatcccgaccttccatcccagctacatcctg
cgcggcaaccgcatcgaggaacccctcttccacgccgacgtgaagctggccgcggagcgg
gcgggatga
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