Skermanella rosea: JL101_004325
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Entry
JL101_004325 CDS
T07666
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sroe03036
]
JL101_004325 (smc)
Chromosome and associated proteins [BR:
sroe03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JL101_004325 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
ABC_tran
DUF3450
CCDC53
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UEM04678
LinkDB
All DBs
Position
complement(922664..926125)
Genome browser
AA seq
1153 aa
AA seq
DB search
MQFVKLRISGFKSFVDPTELVIEPGMTGIVGPNGCGKSNLVEALRWVMGETSAKKMRGDD
MDDVIFGGTDRRPARNIAEVTLGVDNSRRTAPAGFNEFDDLEIQRRIERGSGSDYRINGK
LVRARDVQLLFADNASGANSPALVSQGRIGTIINAKPTERRVLLEEAAGITGLHSRRHEA
ELRLKAAEANLMRLDDVIVTMDAQLGTLRKQARQASRYRNLSEHVRRTEAVLLHIRWVAA
QAALAASRLAFNDAEVLVRDRMGEVAAETTRRAADAEGLPRLRQAEAQAAQALQRLVIAR
EALDAEEKRVAEARTANQRRLAQVATDLARERALAEDAGTALARLADERDGLIEEQGDEA
AVEEAARESLAEARERVEALDRELTALTERTAADEARRTALQRQSAELEQRLATATRRLD
EQQRQRAALEAELASRPDIEAAEEAVAAAEEALDLARDRAEAAEHAKAAAETAQARSREA
QQAADGARARLKAEERALSELLESGSGDLFPPLIDAVTVAPDYEVAIAAALGDDLTAPLD
EAAAVHWRAHPALDHTAPLPAGAEPLASRVKAPPALARCLDHIGVVAGAEEGNALAPTLL
PGQILVTRDGASWRWDGLSVAAGAPTAAAIRLKQRNRLAELRLELESAEDTSAHAREEFE
AARTAASEAAVQERRCRDAVRDAFGVVGRARDQHAKLAQAAAAAASRLTALAEAVERLDA
DRREAERQVAEARAALDALPDSGQARERVADLRATLAETRADLVGRQNALDRILREAQGR
RQRLAAIEAERRGWTGRSDGADERLAELMERAETAKAELEELAGRPDEIESERADLATRI
ADAERVRKRAADTLNEAEATLAATEKRLKQAETGLGDAREARVRAEAAVASARQTLEAVR
ERIAEKLECAPEQTAALADLPPGEPLPDPAGIEARLEKLVRERENMGPVNLLAEAEAAEL
DQQIAGMQSERADLVAAIGRLRQGISSLNREARERLLASFETVDRHFQDMFVRLFGGGKA
YLKLTEAEDPLDAGLEIYASPPGKRLQVLSLLSGGEQALTALSLLFAVFLTNPAPICVLD
EVDAPLDEANVDRFCTLVEEMARVGATRFLIITHHRLTMARMDRLFGVTMGERGVSQLVS
VDLRRAEELRGAA
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
gtgcagttcgtaaagctccgcatctcgggcttcaagtcgttcgtcgaccccaccgaactg
gtgatcgagccgggcatgaccggcatcgtcggccccaacggctgcggcaagtccaacctg
gtcgaggcgctccgctgggtcatgggcgagacctcggccaagaagatgcgcggcgacgac
atggacgacgtcatcttcggcgggaccgacaggcggccggcccgcaacatcgccgaggtg
acgctgggggtggacaactcgcggcgcaccgcccccgccggcttcaacgagttcgacgac
ctggagatccagcgcaggatcgagcgcggctccgggtccgactaccggataaacggcaag
ctggtgcgcgcccgcgacgtccagctgctgttcgccgacaacgccagcggcgccaattcc
ccggcattggtcagccagggccgcatcggcaccatcatcaacgccaagccgaccgagcgc
cgcgtcctgctggaggaggcggccggcatcaccgggctgcattcccggcgccacgaggcc
gagttgcgcctcaaggcggccgaggccaacctgatgcgcctggacgacgtgatcgtcacc
atggacgcccagctcggcacgttgcgcaagcaggcgcggcaagcctcgcgttaccggaac
ctgagcgaacatgtccgccggaccgaggcggtgctgctccatatccgctgggtcgcggcc
caggcggcgctcgcggcgtcgcggctcgccttcaacgatgccgaggtgctggtgcgcgac
cgaatgggcgaggtcgcggccgagaccacccggcgcgccgccgacgccgaggggctgccc
cgcctccgccaggccgaggcccaggcggcccaggcgctccagcggctggtgatcgcccgc
gaggcgctggacgcggaggagaagcgggtcgccgaggcccggaccgccaaccagcgccgg
ctggcccaggtcgccaccgacctggcgcgcgagcgggcgctggcggaggacgccgggacg
gcgctggcccgcctcgccgacgagcgggacggcctgatcgaggaacagggcgacgaggcc
gccgtcgaggaggccgcccgcgagtccctggccgaggcccgcgaacgggtcgaggcgctg
gaccgcgaactgacggcgctgaccgagcggaccgccgcggacgaggcccgccgcaccgcc
cttcagcggcagtccgccgagctggagcagcggctggcgaccgcgacccgccggctcgac
gagcagcagcgccagcgcgcggccctggaggccgagctggcgtcccgtcccgacatcgag
gcggcggaggaagccgtcgccgccgcggaggaggcgctggacctcgccagagaccgggcg
gaggcggcggaacacgccaaggcggcggccgaaaccgcgcaggcccgcagccgcgaggcc
cagcaggcggcggacggcgcccgcgcccggctgaaggcggaggagagggcgctgtcggag
cttctggagtccggctccggcgacctgttcccgccgctgatcgatgccgtcaccgtggcg
ccggactacgaggtggcgatcgccgcggcgctgggcgacgacctgaccgctccgctggac
gaggccgcggcggtccattggcgggctcacccggcgctcgaccataccgcgcccctgccc
gccggggcggagccgctggcctcccgggtcaaggcaccccctgccctggcccgctgcctc
gaccatatcggcgtcgtcgcgggtgccgaggagggtaacgccctggccccgaccctgctg
cccggccagatcctggtcacgcgcgacggcgcctcctggcgctgggacgggctgtcggtc
gcggcgggcgccccgacggcggccgcgatccggctgaagcagcgcaaccgcctcgccgag
cttcgcctggagttggaaagcgccgaggatacctccgcccatgcgcgggaggagttcgag
gccgcccgcaccgccgcgtcggaggccgcggtccaggaacggcggtgccgcgacgccgtg
cgggacgccttcggcgtggtcggccgcgcccgcgaccagcacgccaagctggcccaggcg
gccgcggcggcggcctcccgcctgaccgccctggccgaggcggtggagcgcctggacgcc
gaccggcgcgaagccgagcgccaagtcgccgaagcccgggccgccttggacgcgctgccc
gactcgggacaggcacgggagcgggtcgccgacctgcgcgccaccctggcggagacccgc
gccgatctggtcggccggcagaacgcgctggaccgcatcctgcgcgaggcccagggccgg
cgccagcgcctcgccgcgatcgaggcggaacggcgcggctggaccggccggtccgacggg
gcggacgagcggctggccgaactgatggagcgcgccgagaccgcgaaggcggaactggag
gagctggccggccgcccggacgagatcgagtccgagcgggccgacttggcgacccggatc
gccgatgccgaacgcgtgcgcaagcgcgccgccgacaccctgaacgaggccgaagcgacg
ctggccgccaccgagaagcgcctgaaacaggcggagacggggctgggcgacgcccgcgag
gcccgggtgcgggcggaagccgccgtggcctcggcccgccagacgctggaggcggtgcgc
gagcggatcgccgagaagctggaatgcgcgccggagcagacggccgccctggccgacctg
ccgcccggcgagccgcttcccgacccggccggcatcgaggcgcggctggagaagctggtg
cgcgagcgcgagaacatgggccccgtcaacctgctggcggaggccgaggcggccgagctg
gaccagcagatcgccggcatgcagagcgagcgcgccgatctggtcgccgcgatcggccgg
ctgcgccagggcatctccagcctcaacagggaggcgcgggagcgtctgctggcctcgttc
gagacggtggaccggcatttccaggacatgttcgtccggctgttcggcggcggcaaggcg
tacctgaagctgaccgaggcggaggacccgctggacgccgggcttgagatctatgccagc
ccgccgggcaagcggctccaagtgctgtccctgctgtcgggcggcgagcaggcgctgacc
gcgctgtcgctgctgttcgccgtgttcctgaccaacccggcgccgatctgcgtgctggac
gaggtggacgctcccctggacgaggcgaacgtcgaccgcttctgcaccttggtcgaggag
atggcccgcgtcggcgccacccgcttcctgatcatcacccaccaccggctgaccatggcc
cgcatggaccggctgttcggcgtcaccatgggcgagcggggggtttcccagctggtttcc
gtcgacctgcgccgcgccgaggaactgcggggcgccgcctga
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