Skermanella rosea: JL101_004705
Help
Entry
JL101_004705 CDS
T07666
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
sroe
Skermanella rosea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
UEM04746
LinkDB
All DBs
Position
complement(1007385..1008998)
Genome browser
AA seq
537 aa
AA seq
DB search
MGWLIGGGFGACLLFGLLAWRFEGRNSGTYGTASWARVWTLFEKGLFHGRGLRVGDWAGQ
LSVFYDGIHAITFGHSGSGKGASAILPNLLSYPWFFLIDPGGENTAIAAKHWRERGFQFG
CINLFGMFPEEPWALPAHGFNPLDFLDPQSRAFAADALVFAEMLTPRTGNESGSNAYFKD
AAQTAKRAMIVHIKTTEPEERQNLATLYRYVSSGAKGWDALLSAMKANPACDGLVSLEAG
ELERIREQASEEFSAIKSTMRQDLSFLADPLVREKLSRSDVDFSILKGLKPDQRGGIISV
VLPLEYMDSHAAILRLALACAILEMQRKPLAKSKVIFLIDEAAALGRILRFPSWLATMRK
YRVVIWSIWQNMGQLVDLYGKGWQTLIGNCGLLQILGVGDLETAEHTEKLLGKCTIRTVS
TNGRGERSHSETGRSLLMDDELRRLEEDQQVVFIGNLPPIALRKTPYWHRPEFAGRFYRN
PYFDHDAPGVSAGDHLNALGGRLYLALVWWMAPHPIAACIIMLPIALYVLSAILGGR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggatggctcatcggaggagggtttggagcgtgcctcctcttcggcctgctcgcctgg
cgcttcgagggccgcaattccggtacatacgggacggcaagctgggcgcgggtctggacg
ctattcgaaaagggactgttccacgggcgcggcctgcgggtcggggactgggcgggacag
ctcagtgtcttttatgacggcattcacgccatcaccttcggtcactcgggctcaggcaag
ggcgcatccgcgatcctgcccaaccttctatcctatccgtggttcttcctgatcgatccg
ggcggcgagaacaccgccatcgccgcgaagcactggcgggagcgcggctttcaattcggc
tgcatcaacctcttcggcatgtttccggaagagccgtgggcgctgcctgcgcacggcttc
aacccgctcgatttcctcgatccccaaagccgggcctttgcggcggacgcgctggtcttc
gccgagatgctgacgccgcgcaccggcaatgagagtggctccaacgcctacttcaaggat
gcggcccagacggcaaagcgggcgatgatcgttcacatcaaaacgacggagccggaggaa
cggcagaacctcgcaacgctgtaccggtacgtgagcagcggcgcgaagggctgggacgcc
ctcctgtcggccatgaaggccaatccggcctgcgatggcctcgtcagcctcgaagcgggc
gaattggagcggatcagggaacaggcctcggaagaattctcggcgatcaaatcgacgatg
cgccaggatttgagctttcttgccgatccgctggtccgcgagaagctcagccgttcggac
gtggatttttccattctcaagggcctcaagcccgatcagcggggcggcatcatcagcgtc
gtcctgccgctggaatacatggacagccacgcggccatcctgcgcctcgcgctcgcctgc
gccatcctggagatgcagcgcaagccgcttgcgaagagcaaggtcatcttcctgatcgat
gaagcggcggcactgggaagaatcctgcgtttcccgagctggctcgcgacgatgcgcaaa
taccgcgtcgtgatctggagcatctggcagaacatgggtcagctcgtcgatctttacggc
aagggctggcagacgctcatcggcaattgcggcctgctccagatcctcggcgtcggcgat
ctcgaaaccgccgagcacaccgagaagctcctcggcaagtgtacgatcaggaccgtcagc
acgaacgggcgcggtgagcgctcccattccgaaaccggccggtctctgctgatggacgac
gagctgcgccgcctcgaagaggatcagcaggtcgtgttcatcggcaatctgccgccaatc
gcgctgcgcaagacgccgtactggcaccgcccggaattcgcggggcgcttctaccgcaat
ccctacttcgatcacgacgcgccgggggtgagcgccggcgatcatctgaacgcgctcggc
ggcaggctttatctcgcgctcgtgtggtggatggcgccgcaccccatcgccgcgtgcatc
atcatgctgccgatcgcgctctatgtgctttcggcgatcctgggcgggaggtga
DBGET
integrated database retrieval system
