Skermanella rosea: JL101_004975
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Entry
JL101_004975 CDS
T07666
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sroe
Skermanella rosea
Pathway
sroe00250
Alanine, aspartate and glutamate metabolism
sroe00310
Lysine degradation
sroe00350
Tyrosine metabolism
sroe00650
Butanoate metabolism
sroe00760
Nicotinate and nicotinamide metabolism
sroe01100
Metabolic pathways
sroe01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JL101_004975 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JL101_004975 (gabD)
00310 Lysine degradation
JL101_004975 (gabD)
00350 Tyrosine metabolism
JL101_004975 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
JL101_004975 (gabD)
Enzymes [BR:
sroe01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
JL101_004975 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
JL101_004975 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
JL101_004975 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
UEM06553
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Position
1057691..1059172
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AA seq
493 aa
AA seq
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MTETAATLGLKDAGLLRGQCYVDGQWIDADSGKTIDVTNPANGRKLGTVPAMGAAETRRA
IEAAGRAYPAWRAKTAKERSKILRTWFDLMMANQEDLARIMTAEQGKPIAESRGEIAYAA
SFIEWFAEEAKRVYGDTIPAHLAGRRIVVTKEPVGVCAAITPWNFPAAMITRKAGPALAA
GAPIVIKPATATPYSAFAMAVLAERAGVPAGILSVLTGSAKEIGGEMTTNPIVRKLTFTG
STEIGKQLMSQCAGTVKKVSLELGGNAPFIVFDDADLDEAVKGAIASKYRNTGQTCVCAN
RLLVQNGIYDAFAAKLAEAVKALKVADGLTEGAQQGPLIDMAAIEKVEDHIRDALSKGAR
IVVGGERHPLGGTFFQPTVLADVTTEMKVTREETFGPVAPLFRFDTEEEAVRMANDTEYG
LAAYFYSRDVGRIWRVAEGLEYGIVGINEGIISTEVAPFGGMKESGVGREGSKYGMEEYL
EIKYLCMGGVDNA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaccgcggcaacgctcggcctcaaggatgccgggctgctgcgcggccagtgc
tatgtcgacggtcagtggatcgatgccgacagcggcaagaccatcgacgtcaccaacccc
gcgaacggcaggaagctcggcaccgtcccggccatgggcgcggccgagacgcggcgcgcg
atcgaggccgccggccgggcctatcccgcgtggcgcgccaagaccgccaaggagcgctcc
aagatcctgcggacctggttcgacctgatgatggcgaaccaggaggacctcgcccggatc
atgaccgcggagcagggcaagccgatcgccgagtcgcggggcgagatcgcctatgccgcc
tccttcatcgagtggttcgccgaggaggcgaagcgggtctacggcgataccatcccggcg
cacctcgccggccgccggatcgtggtgaccaaggagccggtcggcgtctgcgccgccatc
acgccgtggaacttcccggccgccatgatcacccgcaaggccggccccgcgctggccgcc
ggcgccccgatcgtgatcaagccggccacggcgacgccttattcggccttcgccatggcc
gtcctggccgagcgggccggggttccggccggcatcctgagcgtcctgacggggtcggcc
aaggagatcggcggcgagatgacgaccaacccgatcgtgcgcaagctgaccttcaccggc
tccaccgagatcggcaagcagctgatgtcccagtgcgccgggacggtgaagaaggtctcg
ctggagcttggcggcaacgcgcccttcatcgtgttcgacgacgccgacctggacgaggcg
gtcaagggcgccatcgcgtccaagtaccgcaacaccgggcagacctgcgtctgcgccaac
cggctgctggtgcagaacggcatctacgacgccttcgccgccaagctggcggaagccgtc
aaggcgctgaaggtggccgacggcctgaccgagggtgcccagcagggtccgctgatcgac
atggcggcgatcgagaaggtcgaggaccatatccgcgacgccctgtccaagggcgcccgg
atcgtcgtcggcggcgagcgccacccgctcggcggcaccttcttccagccgaccgtcctg
gccgacgtcaccaccgagatgaaggtcacccgcgaggagaccttcgggccggtggcgccg
ctgttccgcttcgacacggaggaagaggcggtaaggatggcgaacgacaccgagtacggg
ctggcggcctatttctacagccgtgacgtcggccggatctggcgggtcgccgaagggctg
gaatacggcatcgtcggcatcaacgagggtatcatctccaccgaagtcgcgccgttcggc
ggcatgaaggagagcggagtcggccgggaagggtcgaaatacggcatggaggagtacctg
gagatcaaatatctctgcatgggcggcgtcgacaacgcctga
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