Skermanella rosea: JL101_005615
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Entry
JL101_005615 CDS
T07666
Name
(GenBank) NAD-dependent epimerase/dehydratase family protein
KO
K01784
UDP-glucose 4-epimerase [EC:
5.1.3.2
]
Organism
sroe
Skermanella rosea
Pathway
sroe00052
Galactose metabolism
sroe00520
Amino sugar and nucleotide sugar metabolism
sroe01100
Metabolic pathways
sroe01250
Biosynthesis of nucleotide sugars
Module
sroe_M01004
UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
JL101_005615
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
JL101_005615
Enzymes [BR:
sroe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.2 UDP-glucose 4-epimerase
JL101_005615
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
NAD_binding_4
NmrA
KR
adh_short_C2
adh_short
Motif
Other DBs
NCBI-ProteinID:
UEM04914
LinkDB
All DBs
Position
complement(1204157..1205101)
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AA seq
314 aa
AA seq
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MAFWLVTGGCGFIGSHLVDALVARGDRVRVLDDLSTGRRSNLPPGVDLMVGDVADAAAVS
RAMAGVDGCFHLAAVASVQRGNEDWLGTHRVNLTGTVAVFDAARTCNPGGPVPVVYASSA
AVYGDNPEMPLTETDATAPLSAYGADKLGCELHGRVAWRVHGVPSTGFRFFNVYGPRQDP
KSPYSGVIAIFADRVAGRREITVNGDGGQTRDFVYVSDVVRHLVAAMDRRPDGSAVYNVC
TGRPTTVLDLARIISRIGGIEPRIAQGPARAGDIRESLGDPRRAAAAFGFTADTPVAEGL
RETLAAISRGIAAE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggttggttaccggcggttgcggtttcatcggctcgcatctggtggacgcg
ctggtcgcgcggggcgaccgcgtgcgggtgctcgacgacctgtcgacgggaaggcggtcc
aacctgccgccgggcgtcgacctgatggtcggtgacgtggcggacgccgcggcggtgtcc
cgcgccatggccggcgtggacgggtgcttccacctggcggccgtcgcctcggtccagcgg
ggcaacgaggactggctgggcacccaccgggtcaacctgaccggcaccgtcgccgtgttc
gacgccgcccggacctgcaacccgggcggtcccgtcccggtggtctacgcctcctcggcg
gcggtctacggcgacaatccggagatgccgctgacggagaccgatgccaccgcccccctg
tcggcctacggcgcggacaagctgggctgcgagcttcacggacgggtggcgtggcgggtc
cacggcgtgccgtccaccggattccgcttcttcaatgtctacgggccgcgccaggacccg
aagtcgccctattccggcgtgatcgcgatcttcgccgaccgggtggccgggcgccgcgag
atcacggtgaacggagacggcggccagacccgcgacttcgtctatgtctcggatgtggtc
cggcatctggtggccgcgatggaccgcaggccggacggcagcgccgtctacaatgtctgc
accgggcggcctacgacggtgctagacctggcgcggatcatctcgcgcatcggcgggatc
gagccccgcatcgcccaaggccccgcccgcgccggcgacatccgcgagtcgctgggagat
ccgcgccgggcggcggcggccttcggcttcaccgccgacactcccgtcgcggagggattg
cgggagacgctggcggcgatctcccgcgggatcgccgccgagtag
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