Skermanella rosea: JL101_005650
Help
Entry
JL101_005650 CDS
T07666
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sroe03021
]
JL101_005650 (rpoH)
Transcription machinery [BR:
sroe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JL101_005650 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SHOCT-like_DUF2089-C
Sigma70_r4_2
SOAR
HTH_11
HTH_28
KORA
HTH_3
Motif
Other DBs
NCBI-ProteinID:
UEM04921
LinkDB
All DBs
Position
complement(1209834..1210703)
Genome browser
AA seq
289 aa
AA seq
DB search
MQPSPSRTDLTRYLSRIREYPMLEATEEQELARAWRDRRCPEAAERLIGSHLRLVAKVAR
GYAGYGLPMADMIAEGNMGMVQALNGFDPDRGYRFTTYALWWIRAAMQEYILRSWSMVRM
GTTGAEKKLFFSLRRAKSAMNLLQEGDLSPEEARQLAETLKVPVADVTGMNGRLAGPDQS
LNLPLPGMEDGQAQDWLVDPSETQEELLAQRQEMERRRKQLKRAMEQLQERERSILAARR
LAEEPLTLEDLSRQFGISRERVRQIEARAIEKLQRMMTGGRRMPSLAMA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcagccttcgccaagccggacagatctgacgcgttatctttcccggattcgcgagtat
ccaatgctcgaagcgaccgaggaacaggaactggcgcgagcctggcgcgaccgccgctgt
ccggaagccgccgaacggctgatcggcagccatctccgcctcgtcgccaaggtcgcccgc
ggctacgccggctacggcctgcccatggccgacatgatcgccgagggcaacatgggcatg
gtccaggcgctgaacggcttcgaccccgaccggggctaccgtttcaccacctacgccttg
tggtggatccgcgcggccatgcaggaatatatcctgcgatcctggtcgatggtaaggatg
ggcaccaccggggcggagaagaagctgttcttcagcctgcgccgggccaagagcgccatg
aacctgcttcaggaaggcgacctgagcccggaggaggcccggcagctcgccgagaccctg
aaggtgccggtcgccgacgtgacgggcatgaacggccggctggcgggtcccgaccagtcg
ctgaacctgccgctgcccggcatggaggacggccaagcccaggactggctggtcgacccg
tcggagacgcaggaggaactgctggcccagcgccaggagatggaacgcaggaggaagcag
ttgaagcgggcgatggagcagttgcaggagcgcgagcgctcgatcctggcagcccgccgg
ctggcggaggaaccgctcaccctggaggacctgtcgcgccagttcggcatcagccgcgag
cgggtgcgccagatcgaggcgcgggcgatcgagaagctccagcgcatgatgaccggcgga
cggcgcatgccgtccctggccatggcctga
DBGET
integrated database retrieval system
