Skermanella rosea: JL101_006150
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Entry
JL101_006150 CDS
T07666
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sroe03032
]
JL101_006150
03036 Chromosome and associated proteins [BR:
sroe03036
]
JL101_006150
03400 DNA repair and recombination proteins [BR:
sroe03400
]
JL101_006150
DNA replication proteins [BR:
sroe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JL101_006150
Chromosome and associated proteins [BR:
sroe03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JL101_006150
DNA repair and recombination proteins [BR:
sroe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JL101_006150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_bac_1
DUF2267
HU-CCDC81_euk_1
Phage_cement_2
VWA_3
DUF937
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
UEM05019
LinkDB
All DBs
Position
complement(1310681..1310956)
Genome browser
AA seq
91 aa
AA seq
DB search
MNRAELVAAVADQTGQTKADAGKAVDAAFTVIAQALASGDEVKVPNFGSFSVAERAAREG
RNPQSGEKITIAASKQAKFSAAKGLKDALNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgagccgaactcgtggccgccgtggccgaccagacggggcagacgaaagcggat
gccggcaaggcggtcgacgccgcgttcactgtcatcgcccaggctttggcgtccggcgac
gaggtcaaggttccgaatttcggcagcttcagcgtggctgaacgggccgctcgcgaaggg
cgcaatccccagagcggcgagaagatcaccatcgctgcgtcgaagcaggcgaagttttcg
gcggccaagggcctgaaggacgccctgaacggctga
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integrated database retrieval system
