Skermanella rosea: JL101_007075
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Entry
JL101_007075 CDS
T07666
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sroe
Skermanella rosea
Pathway
sroe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JL101_007075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sroe03400
]
JL101_007075
Enzymes [BR:
sroe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JL101_007075
DNA repair and recombination proteins [BR:
sroe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JL101_007075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
PIF1
HHH_2
Helicase_RecD
NTPase_1
AAA_16
AAA_22
nSTAND3
RsgA_GTPase
NPHP3_N
TraI_hel_assoc_N
MeaB
T2SSE
NACHT
AAA
TsaE
UvrD-helicase
AAA_28
ATP_bind_1
AAA_29
DNA_pol_lambd_f
CbiA
cobW
MobB
AAA_24
ABC_tran
DnaB_C
Mg_chelatase
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
UEM06569
LinkDB
All DBs
Position
1517140..1519368
Genome browser
AA seq
742 aa
AA seq
DB search
MTAVQHRVEQPNRPASPAPDREVLAGLVERVTFHNAENGFCVLRIKARGHRDLITVVGHA
ASISAGEFVQASGAWHNDRTHGLQFKAGFLRTTMPTTVEGIEKYLGSGMIRGIGPVYAKK
LVRAFGADVFDVIEQQADRLREVAGIGPVRAKRIIAGWADQKVIREIMLFLHSHGVGTSR
SVRIFKTYGPDAIQLISENPYRLARDIRGIGFVTADAIAARLGIEKTAMVRARAGIAYAL
AEAMDEGHCGLPRGDLLALAEKLLDIPSPLIEEAIDLELADGTVVADRLDGAEAVFLAGL
YRSERNIATRLLGLAAGRPPWGAIDAATAIPWVEQRTGLTLAESQRAAVRLAVSSKLLVV
TGGPGVGKTTLVNSILKILAVKGLAIALAAPTGRAAKRLSESTGMEAKTIHRLLETDPAA
GGFKRTETNPLECELLVVDETSMVDVPLMNALLRAVPNGAAVLLVGDVDQLPSVGPGQVL
ADVINSGAVPVVRLTEVFRQAAESRIIVNAHRVNKGLMPEPYAGEGLTDFYFVDAADPKD
GVRKVLHMVKHRIPDRFGLDPVRDIQVLCPMNRGGLGARSLNIELQKVLNPPRDPRVERF
GWTFCEGDKVMQIENDYDKEVYNGDLGVVARIDPDDNSLLIEFDGREVAYDAGELDQVVL
AYATTIHKSQGSEYPAVILPVTTQHYAMLQRNLVYTGITRGKRLVVVVGQRKAMAIAVKG
QQSRRRWSKLRDWLGGGAGNAP
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggtccagcacagggtggaacagcccaacaggccggcgtcgcccgcgccggac
cgggaagtccttgccggtctggtcgagcgggtgaccttccacaatgcggagaacggcttc
tgcgttctccgcatcaaggcgcgcggccatcgcgacctgatcaccgtcgtcggccatgcc
gcctcgatctcggcgggcgaattcgtccaggccagcggcgcttggcacaacgaccgcacc
cacggcctccagttcaaggccgggttcctgcgcacgaccatgccgaccaccgttgaaggg
atcgagaaatatctcggctccggcatgatccgcggcatcgggccggtctatgccaagaag
ctggtgcgggccttcggcgcggacgtgttcgacgtgatcgagcagcaggccgaccggctg
cgcgaggtggccgggatcgggccggtgcgggccaagcggatcatcgccggctgggccgac
cagaaggtgatccgcgagatcatgctgttcctgcattcccacggcgtcggcacctcgcgg
tcggtccgcatcttcaagacctacggacccgacgcgatccagctcatctcggagaatccc
taccgcctcgcccgcgacatccgcggcatcggcttcgtcacggcggatgccatcgcggcc
cgcctcggcatcgagaagaccgccatggtcagggcgcgggccggcatcgcctatgccctg
gcggaggccatggacgaggggcattgcggcctgccgcgtggcgacctgctggcgctcgcg
gaaaagctgctcgacatcccatcgccgctgatcgaggaagccatcgacctcgagctggcg
gacggcaccgtggtggccgaccggctcgacggggcggaggccgtgttcctggcgggcctc
taccgctccgaacgcaacatcgccacccgcctgctgggcctcgccgcgggccggccgccg
tggggcgccatcgacgccgccaccgcgattccctgggtcgagcagcgcactggcctgacc
ctggccgagagccagcgagccgctgtccggctcgcggtctcgtccaagcttctggtcgtc
accggcggccccggggtcggcaagaccacgctggtcaactcgatcctgaagatcctggcg
gtcaagggcctcgccatagcgctcgccgcccccaccggccgggcggccaagcgcctgtcc
gagagcacagggatggaggccaagaccatccatcgcctgctggagaccgatcccgccgcc
ggcggcttcaagcggaccgaaacgaatccgctggagtgcgagctgctggtggtggacgag
acctccatggtcgacgtgcccctgatgaacgccctgctgcgcgccgtgcccaacggcgcc
gccgtgctgctggtcggagacgtcgaccagcttccctccgtggggccggggcaggtgctg
gccgacgtgatcaattccggcgccgtgccggtggtccggctgaccgaggtgttccgccaa
gccgccgagagccggatcatcgtcaacgcccaccgggtgaacaagggcctgatgccggag
ccctacgccggcgagggcctgaccgatttctacttcgtggatgccgccgacccgaaggac
ggggtgcgcaaggtgctccacatggtcaagcaccgaatccccgaccgcttcggcctcgac
cccgtgcgcgacatccaggtgctgtgcccgatgaaccggggcgggctgggcgcccgatcg
ctcaatatcgagcttcagaaggtgctgaaccccccgcgcgatccccgcgtcgaacggttc
ggctggaccttctgcgagggcgacaaggtgatgcagatcgagaacgactacgacaaggag
gtctataacggcgacctcggcgtggtcgcccgcatcgatcccgacgacaattccctgctg
atcgagttcgacggccgcgaggtcgcgtatgacgccggcgagctggaccaggtggtcctg
gcctacgccaccacgatccacaagtcccaggggtcggagtacccggcggtgatcctgccg
gtcaccacccagcactacgcgatgctccagcgcaacctggtctatacgggcatcacgcgc
ggcaagcgcctggtcgtcgtcgtcggccagcgcaaggccatggctatcgccgtcaagggc
cagcagagccgccgccgctggtcgaagctgcgggactggctgggcggcggagcgggtaac
gcgccgtag
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