Skermanella rosea: JL101_007190
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Entry
JL101_007190 CDS
T07666
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
sroe
Skermanella rosea
Pathway
sroe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL101_007190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_007190
Transporters [BR:
sroe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JL101_007190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
UEM06570
LinkDB
All DBs
Position
1549281..1550321
Genome browser
AA seq
346 aa
AA seq
DB search
MGCKTSLLFGALLMASAMGGAQARDLTVTSWGGSYQDAQREVYFQPFMKQTGTKLVEDSW
NGGVGALRAKVEGGNADWDVVQVEAEELVLGCEEGLFEELDWAALGGRDKFIPAAVHDCG
VGAIVWTTLITYDGAKMKEGPKSWADFWDVQKFPGKRGLRRGPKYTLEFALMADGVEPSQ
VYQVLGTDAGVDRAFKKLDQIKPHMVWWEAGAQPLQLLASGEVAMTSAYNARVTAANKSD
NRDFRIVWPGGVYAVDSWVILRDSPNREAGMDLIAFMSDPARQKDLPPKVPYGVTAKEAA
ALVDPAVLPIMPTEPGNLEVGLELDTEFWVANVERLTERFNAWIGQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcaagaccagcctgcttttcggtgcgcttctgatggcctcggcgatgggcggt
gcccaggcccgcgatctcaccgtcacctcctggggtggctcctaccaggacgcgcaacgc
gaggtctatttccagcccttcatgaagcagaccgggaccaagctggtcgaggacagctgg
aacgggggagtgggcgcgctccgcgccaaggtcgagggcggcaacgccgactgggacgtc
gtccaggtcgaggccgaggaactggtgctgggctgcgaggaagggctgttcgaggagttg
gactgggcggccttgggcgggcgcgacaagttcattcccgccgcggtccacgactgcgga
gtgggggccatcgtctggaccacgctgatcacctatgacggcgccaagatgaaggaaggg
ccgaagagctgggccgacttctgggacgtccagaagtttcccggcaagcgcggactccgc
cgcggccccaaatacacgctcgagttcgccctgatggccgacggggtcgagccgtcgcag
gtctaccaagtgctcggcaccgacgccggggtcgaccgcgccttcaagaagctcgaccag
atcaagccgcacatggtctggtgggaggccggcgcccagccgctccaactgctggcgtcg
ggcgaggtcgcgatgaccagcgcctacaatgcccgcgtgacggcggccaacaagagcgac
aaccgcgacttcaggatcgtctggccgggcggcgtctatgccgtggacagctgggtgatc
ctgcgcgacagcccgaaccgggaagcgggcatggacctgatcgccttcatgagcgacccg
gcgcgccagaaggacctgccgcccaaggtgccctacggcgtgaccgccaaggaggccgcg
gcgctggtcgatcccgccgtgctgccgatcatgccgaccgagcccggcaacctggaagtc
gggctggaactcgacaccgaattctgggtcgccaacgtcgagcggctgaccgaacgcttc
aacgcctggatcggccagtga
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