Skermanella rosea: JL101_007315
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Entry
JL101_007315 CDS
T07666
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sroe03009
]
JL101_007315 (der)
Ribosome biogenesis [BR:
sroe03009
]
Prokaryotic type
GTPases
JL101_007315 (der)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
Ras
RsgA_GTPase
Roc
ABC_tran
SRPRB
AAA_22
Septin
AAA_24
Arf
TniB
cobW
Motif
Other DBs
NCBI-ProteinID:
UEM05237
LinkDB
All DBs
Position
1576090..1577478
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AA seq
462 aa
AA seq
DB search
MSLTVAIIGRPNVGKSTLFNRLVGKKLALVDDTPGVTRDWRAAPARLAGIDLTVIDTAGL
EEAFDDSLEARMRRQTERAIEEADVALLLIDARAGVTPLDQHFATWLRKGKTPVILLANK
CEGRAGAPGLYEAFELGLGEPVPISAEHGEGLAELVEALLPYVPPEESQPDTDREAEAGI
EPEAREDGRPEPVRPLQLAIVGRPNVGKSTLLNSLVGEERVLTGPEAGMTRDAITVEWTY
RDRPIRLVDTAGMRRKSRVDDKLEKLAVADALRVIRLAQVVVLVVDAEAILDHQDLTIAR
MVLDEGRALVIAVNKWDTVTDRAGTLKQINDKLQSQLAQVRGIPVVTLSALRRQKLDALL
DAVLDIYEIWNRRVGTSDLNRWLAGMTEAHPPPAVEGRRIKIRYMTQVKARPPTFALWVS
KPLDLPETYIRYLVNGLRESLDLPGVPIRMLTRKGKNPYAEE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcaccgtcgcgatcatcggccggcccaatgtcggcaagtccaccctgttcaac
cggcttgtcggcaagaagctggcgctggtggacgacactcccggcgtcacccgtgactgg
cgcgcggcgccggcacggctggccggcatcgacctgaccgtgatcgacaccgccgggctg
gaagaagccttcgacgacagcctcgaggcgcgcatgcgccgccagacggagcgggcgatc
gaggaggcggacgtcgccctgctgctgatcgacgcgcgggccggcgtcacgccgctggac
cagcacttcgcgacttggctccgcaagggcaagacgccggtcattctgctcgccaacaaa
tgcgagggcagggcgggtgcgcccggcctctacgaggcgttcgaactcggccttggcgag
ccggtgccgatctcggccgagcatggcgagggtctggctgaactggtcgaggcccttctg
ccctacgtgccgcccgaggaaagccagccggacaccgatcgggaggccgaggccggcatc
gaaccggaagcgcgcgaggacggcaggcccgagccggtgcgcccgcttcagctcgcgatc
gtcgggcggcccaatgtcggcaagtcgaccctgctgaacagccttgtcggcgaggaaagg
gtcctgaccggtcccgaggccggcatgacccgcgacgccatcacggtggagtggacatac
agggacaggccgatccggctggtcgataccgccgggatgcgcaggaagtcgcgcgtcgac
gacaagctggagaagctggccgtcgccgatgccctacgggtgatccggctggcgcaggtg
gtcgtgctggtggtcgatgccgaggcgatcctggaccaccaggacctgaccatcgcccgc
atggtgctggacgaggggcgcgccctggtgatcgcggtcaacaagtgggacaccgtgacc
gaccgtgccggcacgctgaagcagatcaacgacaagctgcagtcgcagctcgcccaggtc
cggggaatccccgtcgtgaccctgtccgccctgcgccgccagaagctcgacgccctgctc
gacgccgtgctggacatctacgagatctggaacaggcgcgtcggcacgtcggacctgaac
cgctggctggcaggcatgaccgaggcgcatccgccgccggcggtcgagggacggcggatc
aagatccgctacatgacccaggtgaaggcccgcccgcccaccttcgccctgtgggtcagc
aagccgctcgacctgccggagacctatatccgctatctggtgaacgggcttcgagagtcg
ctcgacctgcctggggtgccgatccgcatgctgacacgcaaaggcaagaacccgtatgcg
gaggaatag
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